RNA–Protein interactions for RNA: ENST00000526669.6

CD44-224, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5 BASIC

Gene CD44, Length 870 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-224ENST00000526669 TNFAIP8O95379 198 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 GLRXP35754 106 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 FABP6P51161 128 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 GBX2P52951 348 aaPredicted RBP11.79□□□□□ -0.52
CD44-224ENST00000526669 WNT4P56705 351 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 NANOS3P60323 173 aaKnown RBP11.79□□□□□ -0.52
CD44-224ENST00000526669 RPS23P62266 143 aaKnown RBP11.79□□□□□ -0.52
CD44-224ENST00000526669 MED22Q15528 200 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 ALKBH6Q3KRA9 238 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 KCTD21Q4G0X4 260 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 COLCA1Q6ZS62 124 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 COMMD2Q86X83 199 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 PRSS35Q8N3Z0 413 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 OR2G2Q8NGZ5 317 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 TMEM171Q8WVE6 324 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 FBXW5Q969U6 566 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 SYT3Q9BQG1 590 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 SOX7Q9BT81 388 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 MND1Q9BWT6 205 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 CDCA4Q9BXL8 241 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 OR10A2Q9H208 303 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 MYEF2Q9P2K5 600 aaKnown RBP11.79□□□□□ -0.52
CD44-224ENST00000526669 CMAHPQ9Y471 501 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 DYSFO75923 2080 aa11.79□□□□□ -0.52
CD44-224ENST00000526669 TANC2Q9HCD6 1990 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 P2RY10O00398 339 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 HS3ST1O14792 307 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ICMTO60725 284 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 TTRP02766 147 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 PRF1P14222 555 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 DCTDP32321 178 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ZNF92Q03936 586 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 MALLQ13021 153 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ALKBH1Q13686 389 aaKnown RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 ADIPOQQ15848 244 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ZNF718Q3SXZ3 478 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 TMEM255AQ5JRV8 349 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ZNF773Q6PK81 442 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 KCTD20Q7Z5Y7 419 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 OR5AS1Q8N127 324 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 ZNF485Q8NCK3 441 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 OR5L1Q8NGL2 311 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 OR51E1Q8TCB6 317 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 CMBLQ96DG6 245 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 MARS2Q96GW9 593 aaKnown RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 REEP6Q96HR9 211 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 LYZL4Q96KX0 146 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 MYCBPQ99417 103 aaPredicted RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 DHRS9Q9BPW9 319 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 MRPL37Q9BZE1 423 aaKnown RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 NUFIP1Q9UHK0 495 aaKnown RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 DUSP13Q9UII6 198 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 LSM2Q9Y333 95 aaKnown RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 SIRT4Q9Y6E7 314 aaPredicted RBP11.78□□□□□ -0.52
CD44-224ENST00000526669 POLQO75417 2590 aa11.78□□□□□ -0.52
CD44-224ENST00000526669 TACC2O95359 2948 aa11.77□□□□□ -0.52
CD44-224ENST00000526669 XRCC2O43543 280 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 OR4A8P0C604 315 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 GCH1P30793 250 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 MMP16P51512 607 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 KRTAP10-9P60411 292 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 GK2Q14410 553 aaPredicted RBP11.77□□□□□ -0.53
CD44-224ENST00000526669 RNLSQ5VYX0 342 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 OR2T2Q6IF00 324 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 UNQ6126/PRO20091Q6UXV3 157 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 MRPL21Q7Z2W9 205 aaKnown RBP11.77□□□□□ -0.53
CD44-224ENST00000526669 ELMOD2Q8IZ81 293 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 RDH10Q8IZV5 341 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 SPARTQ8N0X7 666 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 SVOPQ8N4V2 548 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 OR52H1Q8NGJ2 320 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 SYNPRQ8TBG9 265 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 KLF14Q8TD94 323 aaPredicted RBP11.77□□□□□ -0.53
CD44-224ENST00000526669 NRGNQ92686 78 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 MRPL24Q96A35 216 aaKnown RBP11.77□□□□□ -0.53
CD44-224ENST00000526669 SGK3Q96BR1 496 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 C14orf79Q96F83 325 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 FAM71F1Q96KD3 344 aaPredicted RBP11.77□□□□□ -0.53
CD44-224ENST00000526669 ZNF442Q9H7R0 627 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 MOB1AQ9H8S9 216 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 SP140LQ9H930 580 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 GPR84Q9NQS5 396 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 BABAM2Q9NXR7 383 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 FRRS1LQ9P0K9 344 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 ST6GALNAC2Q9UJ37 374 aa11.77□□□□□ -0.53
CD44-224ENST00000526669 FBN2P35556 2912 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 A0A1W2PPW3 197 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 ACOD1A6NK06 481 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 HSMCR30P0CW71 290 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 ATP6V1B1P15313 513 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 SSTR2P30874 369 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 APOBEC3AP31941 199 aaPredicted RBP11.76□□□□□ -0.53
CD44-224ENST00000526669 KLF3P57682 345 aaPredicted RBP11.76□□□□□ -0.53
CD44-224ENST00000526669 EMX1Q04741 257 aaPredicted RBP11.76□□□□□ -0.53
CD44-224ENST00000526669 SLC3A1Q07837 685 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 PSG7Q13046 419 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 CDK5R1Q15078 307 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 TBCEQ15813 527 aaPredicted RBP11.76□□□□□ -0.53
CD44-224ENST00000526669 ZNF544Q6NX49 715 aa11.76□□□□□ -0.53
CD44-224ENST00000526669 PGAP1Q75T13 922 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms