RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 RPS19BP1Q86WX3 136 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 DEFB106AQ8N104 65 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 CADM2Q8N3J6 435 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZDHHC22Q8N966 263 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR5L2Q8NGL0 311 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 C10orf105Q8TEF2 133 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ASZ1Q8WWH4 475 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ANKRD9Q96BM1 317 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 HSFY1Q96LI6 401 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IMMP1LQ96LU5 166 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TIMM29Q9BSF4 260 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TTTY12Q9BZ98 90 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IQCGQ9H095 443 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZDHHC11Q9H8X9 412 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 AGPAT3Q9NRZ7 376 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 SIGLEC8Q9NYZ4 499 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSMC3IPQ9P2W1 217 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSME2Q9UL46 239 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IQANK1A0A1B0GTG1 560 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 BTBD17A6NE02 478 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAM220BPB1ANY3 271 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 TRDCB7Z8K6 153 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 H7C423 109 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 PFKFB2O60825 505 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 REM1O75628 298 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 UPK3AO75631 287 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC25A14O95258 325 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CFC1BP0CG36 223 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CFC1P0CG37 223 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LOXP28300 417 aaPredicted RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CD79BP40259 229 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 XCR1P46094 333 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 HLCSP50747 726 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATP12AP54707 1039 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 MS4A2Q01362 244 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC10A1Q14973 349 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 RBMY1FQ15415 496 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CYTH1Q15438 398 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 BCL7AQ4VC05 210 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 EIPR1Q53HC9 387 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LRRC66Q68CR7 880 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR5M10Q6IEU7 315 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ADAM5Q6NVV9 412 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 H3F3CQ6NXT2 135 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 RNASEKQ6P5S7 137 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SPESP1Q6UW49 350 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 LRRC74BQ6ZQY2 392 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 NELFCDQ8IXH7 590 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM156Q8N614 296 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2T33Q8NG76 320 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAM81AQ8TBF8 368 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZPLD1Q8TCW7 415 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC38A4Q969I6 547 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ECHDC3Q96DC8 303 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 CENPKQ9BS16 269 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF670Q9BS34 389 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SFXN3Q9BWM7 321 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 KIR3DX1Q9H7L2 352 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ADAP2Q9NPF8 381 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 GLRX2Q9NS18 164 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 C14orf105Q9NVL8 296 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 FAIMQ9NVQ4 179 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF446Q9NWS9 450 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 EURLQ9NYK6 297 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SPRR3Q9UBC9 169 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 WARS2Q9UGM6 360 aaKnown RBP3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 SLC2A6Q9UGQ3 507 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 MED12LQ86YW9 2145 aa3.65□□□□□ -1.83
HMGB1P23-201ENST00000518743 IGLV3-10A0A075B6K4 115 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PINLYPA6NC86 204 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RPL37AP8A6NKH3 93 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 SULT2B1O00204 365 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DYNC1I1O14576 645 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RNF13O43567 381 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 CDH16O75309 829 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ATP5LO75964 103 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 KBTBD11O94819 623 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 RENP00797 406 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 FGF4P08620 206 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 IFNA8P32881 189 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 UGT2B10P36537 528 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 HSD17B2P37059 387 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 PAX8Q06710 450 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ST3GAL3Q11203 375 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 HNRNPA0Q13151 305 aaKnown RBP3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DPYSL3Q14195 570 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 GNMTQ14749 295 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TIGITQ495A1 244 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 BRMS1LQ5PSV4 323 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZC2HC1BQ5TFG8 222 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF57Q68EA5 555 aaPredicted RBP3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 C2orf66Q6UXQ4 117 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ZNF600Q6ZNG1 722 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 DHDDSQ86SQ9 333 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 LINC01561Q8N1V8 128 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 ABHD12Q8N2K0 398 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 COMMD1Q8N668 190 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 TMEM251Q8N6I4 163 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 OR2M7Q8NG81 312 aa3.64□□□□□ -1.83
HMGB1P23-201ENST00000518743 AGR3Q8TD06 166 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 96.9 ms