RNA–Protein interactions for RNA: ENST00000509277.5

LIMCH1-209, Transcript of LIM and calponin homology domains 1, humanhuman

TSL 2 BASIC

Gene LIMCH1, Length 3,474 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMCH1-209ENST00000509277 HGDQ93099 445 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 SGCZQ96LD1 299 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 LAT2Q9GZY6 243 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 TLNRD1Q9H1K6 362 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 SERINC1Q9NRX5 453 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 ADAM18Q9Y3Q7 739 aa7.75□□□□□ -1.17
LIMCH1-209ENST00000509277 NPIPA2E9PIF3 369 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 NPIPB9F8W1W9 429 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 NPIPA3F8WFD2 350 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 MAS1P04201 325 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 LIMS3P0CW19 117 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 LIMS4P0CW20 117 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 PLA2G5P39877 138 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 OMPP47874 163 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 OR12D2P58182 307 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 C2orf68Q2NKX9 166 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM225Q6GV28 225 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 OR52W1Q6IF63 320 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 OR4K13Q8NH42 304 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 SGK3Q96BR1 496 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 C4orf36Q96KX1 117 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 EMC6Q9BV81 110 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 ACAD8Q9UKU7 415 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 ICAM5Q9UMF0 924 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 BOKQ9UMX3 212 aaPredicted RBP7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 ICE1Q9Y2F5 2266 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 NUP210LQ5VU65 1888 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 A0A0B4J2E0 115 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 A0A1B0GX12 115 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 A6NLC8 198 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 PYCARD-AS1I3L0S3 204 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 SERPINA5P05154 406 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 CLUP10909 449 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 CPEP16870 476 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 EDNRAP25101 427 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 CD80P33681 288 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 SRSF3P84103 164 aaKnown RBP7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 RNLSQ5VYX0 342 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 UNQ6494/PRO21346Q6UXR6 183 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 OR14A2Q96R54 314 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 GSKIPQ9P0R6 139 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 GNG8Q9UK08 70 aa7.74□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM72A0PK05 275 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 UNC119BA6NIH7 251 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF705GA8MUZ8 300 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SULT2B1O00204 365 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TNFSF11O14788 317 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 RGS9O75916 674 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 NEURL1O76050 574 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 DXOO77932 396 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 CNOT4O95628 575 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 IGHV3-9P01782 118 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 EPXP11678 715 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SELLP14151 372 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 GABRA1P14867 456 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 NDUFB7P17568 137 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 RPS4Y1P22090 263 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 MST1P26927 711 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SLC6A8P48029 635 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TLE3Q04726 772 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 MEDAGQ5VYS4 303 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM200AQ86VY9 491 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF440Q8IYI8 595 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ARMC10Q8N2F6 343 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TMEM99Q8N816 258 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 PHF3Q92576 2039 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF251Q9BRH9 671 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 REG4Q9BYZ8 158 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SMIM3Q9BZL3 60 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ENKD1Q9H0I2 346 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 FN3KQ9H479 309 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 B4GALT7Q9UBV7 327 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 CHRNA9Q9UGM1 479 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 NDRG3Q9UGV2 375 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 CAMK2AQ9UQM7 478 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TP53TG5Q9Y2B4 290 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF337Q9Y3M9 751 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SIRT4Q9Y6E7 314 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 OR2M5A3KFT3 312 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ABCD4O14678 606 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TERTO14746 1132 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 PRODHO43272 600 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 EIF4E2O60573 245 aaKnown RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 HLA-DQA2P01906 255 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SP1P08047 785 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SULT1A3P0DMM9 295 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SULT1A4P0DMN0 295 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 KLK2P20151 261 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 S100PP25815 95 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 LY6DQ14210 128 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 ZNF627Q7L945 461 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 CDH26Q8IXH8 852 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 INO80EQ8NBZ0 244 aaPredicted RBP7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 C17orf47Q8NEP4 570 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 SDR9C7Q8NEX9 313 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 OR2M7Q8NG81 312 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 OR2M3Q8NG83 312 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 FCAMRQ8WWV6 532 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 TAAR8Q969N4 342 aa7.73□□□□□ -1.17
LIMCH1-209ENST00000509277 OR52D1Q9H346 318 aa7.73□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 57.5 ms