RNA–Protein interactions for RNA: ENST00000503627.2

GYPA-203, Transcript of glycophorin A (MNS blood group), humanhuman

TSL 1 (best) BASIC

Gene GYPA, Length 318 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPA-203ENST00000503627 CHST4Q8NCG5 386 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 OR4K2Q8NGD2 314 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 OR10AD1Q8NGE0 317 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 CDS1Q92903 461 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 CPNE4Q96A23 557 aaPredicted RBP4.04□□□□□ -1.76
GYPA-203ENST00000503627 FAM3DQ96BQ1 224 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 LRRC58Q96CX6 371 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 EBF4Q9BQW3 602 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 GABARAPL3Q9BY60 117 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 YTHDF1Q9BYJ9 559 aaKnown RBP4.04□□□□□ -1.76
GYPA-203ENST00000503627 ING2Q9H160 280 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 SH2D2AQ9NP31 389 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 ZDHHC4Q9NPG8 344 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 APOBEC3BQ9UH17 382 aaKnown RBP4.04□□□□□ -1.76
GYPA-203ENST00000503627 WIF1Q9Y5W5 379 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 MRPS18BQ9Y676 258 aaKnown RBP4.04□□□□□ -1.76
GYPA-203ENST00000503627 RALGAPA1Q6GYQ0 2036 aa4.04□□□□□ -1.76
GYPA-203ENST00000503627 CFAP65Q6ZU64 1925 aaKnown RBP4.03□□□□□ -1.76
GYPA-203ENST00000503627 CEMIPQ8WUJ3 1361 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 ELP1O95163 1332 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 SLC5A10A0PJK1 596 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 FGF16O43320 207 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 CYTH3O43739 400 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 MPZL2O60487 215 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 GALR3O60755 368 aaPredicted RBP4.03□□□□□ -1.76
GYPA-203ENST00000503627 ORM1P02763 201 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 EVI2BP34910 448 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 MYCNOSP40205 109 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 TGM4P49221 684 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 PPP1CBP62140 327 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 IRX1P78414 480 aaPredicted RBP4.03□□□□□ -1.76
GYPA-203ENST00000503627 REG3AQ06141 175 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 ZNF266Q14584 549 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 GOLGA7BQ2TAP0 167 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 TMEM249Q2WGJ8 235 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 CEP85LQ5SZL2 805 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 SDHAF4Q5VUM1 108 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 LINC00173Q6ZV60 143 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 LRRC34Q8IZ02 419 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 OR1N2Q8NGR9 330 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 YIPF6Q96EC8 236 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 FBXO17Q96EF6 278 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 MBOAT7Q96N66 472 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 HBEGFQ99075 208 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 NICN1Q9BSH3 213 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 ARV1Q9H2C2 271 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 ZDHHC11Q9H8X9 412 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 CCL28Q9NRJ3 127 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 USE1Q9NZ43 259 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 AP3M1Q9Y2T2 418 aa4.03□□□□□ -1.76
GYPA-203ENST00000503627 TBL2Q9Y4P3 447 aaKnown RBP4.03□□□□□ -1.76
GYPA-203ENST00000503627 KIAA0232Q92628 1395 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 H7C417 338 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ATP8B1O43520 1251 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 TTC4O95801 387 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 IGHV3-23P01764 117 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 IGHV3-43DP0DP04 118 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ACTR1BP42025 376 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 CDKN2CP42773 168 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 OR12D2P58182 307 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 TAS2R31P59538 309 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 BASP1P80723 227 aaKnown RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 CD164Q04900 197 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 POU2AF1Q16633 256 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 SLC36A2Q495M3 483 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 MOB1BQ7L9L4 216 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 HSD17B13Q7Z5P4 300 aaPredicted RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 OAFQ86UD1 273 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 SLC30A8Q8IWU4 369 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ENTHD1Q8IYW4 607 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 TMEM61Q8N0U2 210 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 PGAM4Q8N0Y7 254 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 TMEM251Q8N6I4 163 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ATP6V1C2Q8NEY4 427 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 OR10Z1Q8NGY1 313 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 OR2AE1Q8NHA4 323 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 DYNC2LI1Q8TCX1 351 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 GTSF1Q8WW33 167 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 GEMIN6Q8WXD5 167 aaKnown RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 RPUSD4Q96CM3 377 aaKnown RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 RNF185Q96GF1 192 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 BTN2A3PQ96KV6 586 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 FAM19A4Q96LR4 140 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 SIGLEC12Q96PQ1 595 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 OPRPNQ99935 248 aaPredicted RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 WACQ9BTA9 647 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 POLR2J2Q9GZM3 115 aaKnown RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 POLR2J3Q9H1A7 115 aaKnown RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 PRORYQ9H606 182 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 SCRT2Q9NQ03 307 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 DDIT4Q9NX09 232 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ZNF581Q9P0T4 197 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 MTFP1Q9UDX5 166 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 ZNF629Q9UEG4 869 aaPredicted RBP4.02□□□□□ -1.77
GYPA-203ENST00000503627 TFR2Q9UP52 801 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 MAP3K5Q99683 1374 aa4.02□□□□□ -1.77
GYPA-203ENST00000503627 PCDH11XQ9BZA7 1347 aa4.01□□□□□ -1.77
GYPA-203ENST00000503627 CAMTA1Q9Y6Y1 1673 aa4.01□□□□□ -1.77
GYPA-203ENST00000503627 FAM240AA0A1B0GVK7 77 aa4.01□□□□□ -1.77
GYPA-203ENST00000503627 A0A1W2PPR1 153 aa4.01□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms