RNA–Protein interactions for RNA: ENST00000494067.5

CTDSP1-212, Transcript of CTD small phosphatase 1, humanhuman

TSL 3

Gene CTDSP1, Length 362 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSP1-212ENST00000494067 ZNF799Q96GE5 643 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TMEM246Q9BRR3 403 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TRIM15Q9C019 465 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TMEM165Q9HC07 324 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 TBC1D23Q9NUY8 699 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 KIF17Q9P2E2 1029 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 BAIAP2Q9UQB8 552 aa11.22□□□□□ -0.61
CTDSP1-212ENST00000494067 GMDSO60547 372 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 PPIAL4GP0DN37 164 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 CLUP10909 449 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 FMO3P31513 532 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 GATA4P43694 442 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 PITPNBP48739 271 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 BLVRAP53004 296 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 PAX2Q02962 417 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 PAX8Q06710 450 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 SNAI3Q3KNW1 292 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF404Q494X3 552 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 DRAM2Q6UX65 266 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 DCDC5Q6ZRR9 648 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 DOK3Q7L591 496 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 OR9Q1Q8NGQ5 310 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 SLC25A28Q96A46 364 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 COPS4Q9BT78 406 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 FN3KRPQ9HA64 309 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 TRIM36Q9NQ86 728 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 ACTR3BQ9P1U1 418 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 CLN8Q9UBY8 286 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 ZNF69Q9UC07 566 aa11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 SOX21Q9Y651 276 aaPredicted RBP11.21□□□□□ -0.61
CTDSP1-212ENST00000494067 IGHV2-70DA0A0C4DH43 119 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SOX14O95416 240 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 IFNGP01579 166 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 GYPBP06028 91 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SPARCP09486 303 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 PRTN3P24158 256 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 CD200P41217 278 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SLC15A1P46059 708 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 NPY4RP50391 375 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 MAB21L1Q13394 359 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 RASSF6Q6ZTQ3 369 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 ARHGAP24Q8N264 748 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 PARP8Q8N3A8 854 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SPERTQ8NA61 448 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SLC37A3Q8NCC5 494 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 C19orf18Q8NEA5 215 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 CLPTM1LQ96KA5 538 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 TSSK6Q9BXA6 273 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 MUC13Q9H3R2 512 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 OPA3Q9H6K4 179 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 REEP1Q9H902 201 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 SP140LQ9H930 580 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 CENPMQ9NSP4 180 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 UFSP2Q9NUQ7 469 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 ARMC1Q9NVT9 282 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 IL20Q9NYY1 176 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 ERVK-18Q9QC07 812 aa11.2□□□□□ -0.62
CTDSP1-212ENST00000494067 WNK2Q9Y3S1 2297 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 NBEAL1Q6ZS30 2694 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 KIR2DS1A0A191URI9 304 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CD300LBA8K4G0 201 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 B2RBV5 119 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 SPRY1O43609 319 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 HKR1P10072 659 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CA6P23280 308 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CD80P33681 288 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CRMP1Q14194 572 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 FAM98BQ52LJ0 330 aaKnown RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 AWAT1Q58HT5 328 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 PRAMEF6Q5VXH4 476 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CD276Q5ZPR3 534 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 LCN8Q6JVE9 175 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 DCXRQ7Z4W1 244 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 DHFR2Q86XF0 187 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 BCL6BQ8N143 479 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 ZNF511Q8NB15 262 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 AQP11Q8NBQ7 271 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 PLPP7Q8NBV4 271 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 OR2T33Q8NG76 320 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 OR2AE1Q8NHA4 323 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 Q8TCH9 128 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 DACT3Q96B18 629 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 LRGUKQ96M69 825 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 ZNF48Q96MX3 618 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 CCT8L2Q96SF2 557 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 KCNJ15Q99712 375 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 NIPSNAP1Q9BPW8 284 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 NUDT16L1Q9BRJ7 211 aaKnown RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 ADAT1Q9BUB4 502 aaKnown RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 NMNAT2Q9BZQ4 307 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 MMADHCQ9H3L0 296 aaPredicted RBP11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 MAGIXQ9H6Y5 334 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 C14orf119Q9NWQ9 140 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 RNF7Q9UBF6 113 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 N6AMT1Q9Y5N5 214 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 COMMD3-BMI1R4GMX3 469 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 U3KQV3 271 aa11.19□□□□□ -0.62
CTDSP1-212ENST00000494067 DNAJC9-AS1A6NH13 148 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms