RNA–Protein interactions for RNA: ENST00000482399.5

VPS52-218, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2 BASIC

Gene VPS52, Length 3,338 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-218ENST00000482399 CLRN1P58418 232 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 RPS4XP62701 263 aaKnown RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 SP6Q3SY56 376 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 FLVCR1-AS1Q8TAF5 88 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SFT2D1Q8WV19 159 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SECTM1Q8WVN6 248 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SLAMF9Q96A28 289 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SLCO5A1Q9H2Y9 848 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 MED9Q9NWA0 146 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 PUS1Q9Y606 427 aaKnown RBP eCLIP11.36□□□□□ -0.59
VPS52-218ENST00000482399 FAM221AA4D161 298 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 XRCC2O43543 280 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 TNFSF14O43557 240 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 BLVRBP30043 206 aaPredicted RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 KIR2DL1P43626 348 aaPredicted RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 CYCSP99999 105 aaKnown RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 ZNF684Q5T5D7 378 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 LINC00114Q6XXX2 140 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SLC22A24Q8N4F4 322 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 TMEM104Q8NE00 496 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 SLC26A10Q8NG04 563 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 ADAT3Q96EY9 351 aaPredicted RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 PIK3IP1Q96FE7 263 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 JSRP1Q96MG2 331 aaPredicted RBP11.36□□□□□ -0.59
VPS52-218ENST00000482399 SOX7Q9BT81 388 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 MFRPQ9BY79 579 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 FBXO7Q9Y3I1 522 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 R4GMQ9 66 aa11.36□□□□□ -0.59
VPS52-218ENST00000482399 K7EPK0 472 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 DIRAS3O95661 229 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 OR13C7P0DN81 318 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 MUC1P15941 1255 aaPredicted RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 CBX5P45973 191 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 CAMLGP49069 296 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 HFEQ30201 348 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 PABPC1L2AQ5JQF8 200 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 PTCRAQ6ISU1 281 aaPredicted RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 RBMS3Q6XE24 437 aaKnown RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 FAM71E2Q8N5Q1 922 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ASH2LQ9UBL3 628 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 URGCP-MRPS24S4R325 110 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 KIR2DS5A0A0G2JLQ3 304 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 A0A0G2JNG1 304 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 KIR2DS3K7RE56 304 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 SSX5O60225 188 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 IFNA21P01568 189 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ARG1P05089 322 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 LINC00271P0C7V0 271 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 JMJD7P0C870 316 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 VSIG8P0DPA2 414 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 NQO2P16083 231 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 OMGP23515 440 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 PTGFRP43088 359 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 KIR2DS5Q14953 304 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 RNF144BQ7Z419 303 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 SLC25A42Q86VD7 318 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ZSCAN4Q8NAM6 433 aaPredicted RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 MFSD8Q8NHS3 518 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TCEAL3Q969E4 200 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 PIGTQ969N2 578 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 SLAMF6Q96DU3 332 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 RRNAD1Q96FB5 475 aaKnown RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 ARHGAP5-AS1Q96IT6 56 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 WDR77Q9BQA1 342 aaPredicted RBP11.35□□□□□ -0.59
VPS52-218ENST00000482399 UQCC2Q9BRT2 126 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TXNIPQ9H3M7 391 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 SUSD2Q9UGT4 822 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 AMDHD2Q9Y303 409 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 IGHV5-51A0A0C4DH38 117 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 A0A1W2PQF6 199 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TTLL8A6PVC2 850 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ZNF850A8MQ14 1090 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 RNASEK-C17orf49H0YIS7 233 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 BCKDHBP21953 392 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ZBTB25P24278 435 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 CTHP32929 405 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 OR3A4PP47883 348 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ABCA11PQ4W5N1 156 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 EMC4Q5J8M3 183 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TMEM92Q6UXU6 159 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 EXD3Q8N9H8 876 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TERB2Q8NHR7 220 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 MITD1Q8WV92 249 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 CLCC1Q96S66 551 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 MEMO1Q9Y316 297 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 ABCA7Q8IZY2 2146 aa11.35□□□□□ -0.59
VPS52-218ENST00000482399 TRBV23-1A0A0A0MS06 115 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 A0A1W2PNR3 127 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 A8MVM7 634 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 RAB27BO00194 218 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 NXPH3O95157 252 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 CD1AP06126 327 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 OPRM1P35372 400 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PPICP45877 212 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 SLC6A8P48029 635 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PJVKQ0ZLH3 352 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PDZD11Q5EBL8 140 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 BRICD5Q6PL45 260 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 LANCL3Q6ZV70 420 aa11.34□□□□□ -0.59
VPS52-218ENST00000482399 PNLDC1Q8NA58 520 aaKnown RBP11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms