RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 ZNF799Q96GE5 643 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 ADAT1Q9BUB4 502 aaKnown RBP17.54■□□□□ 0.4
COL9A3-207ENST00000467819 TNFRSF19Q9NS68 423 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 MAGEL2Q9UJ55 1249 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 POM121CA8CG34 1229 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 IDH3BO43837 385 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 ZNF823P16415 610 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 PRDX6P30041 224 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 MSX2P35548 267 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-207ENST00000467819 IFNGR2P38484 337 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 SNAI3Q3KNW1 292 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 GPR157Q5UAW9 335 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 SFRP4Q6FHJ7 346 aaPredicted RBP17.53■□□□□ 0.4
COL9A3-207ENST00000467819 C16orf87Q6PH81 154 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 CYB561A3Q8NBI2 242 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 OR2AE1Q8NHA4 323 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 GNPDA2Q8TDQ7 276 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 SPTSSAQ969W0 71 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 TMIGD2Q96BF3 282 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 PCGF1Q9BSM1 259 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 EGLN3Q9H6Z9 239 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 FN3KRPQ9HA64 309 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 RNF7Q9UBF6 113 aa17.53■□□□□ 0.4
COL9A3-207ENST00000467819 TVP23AA6NH52 213 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 CD300LBA8K4G0 201 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 ENSAO43768 121 aaKnown RBP17.52■□□□□ 0.4
COL9A3-207ENST00000467819 FABP3P05413 133 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 ANOS1P23352 680 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 PSMB10P40306 273 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 ZNF92Q03936 586 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 TSPAN31Q12999 210 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 RUSC1-AS1Q66K80 236 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 PROKR2Q8NFJ6 384 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 NSMCE2Q96MF7 247 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 FAM107BQ9H098 131 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 CTSZQ9UBR2 303 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 KCNG2Q9UJ96 466 aa17.52■□□□□ 0.4
COL9A3-207ENST00000467819 GGT3PA6NGU5 568 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 C3orf80F5H4A9 247 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 ARPC2O15144 300 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 SFTPBP07988 381 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 PGBD2Q6P3X8 592 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 LYPD4Q6UWN0 246 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 TREML4Q6UXN2 200 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 OR52L1Q8NGH7 329 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 SLC22A4Q9H015 551 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 MARCH7Q9H992 704 aa17.51■□□□□ 0.39
COL9A3-207ENST00000467819 NOP16Q9Y3C1 178 aaKnown RBP17.51■□□□□ 0.39
COL9A3-207ENST00000467819 C5orf63A6NC05 138 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 LGALS8O00214 317 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 ADAM20O43506 726 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 PSKH1P11801 424 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 HSD17B1P14061 328 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 OR8B8Q15620 311 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 KCNJ8Q15842 424 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 GLYATL3Q5SZD4 288 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 ZDHHC21Q8IVQ6 265 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 LNX2Q8N448 690 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 OR51L1Q8NGJ5 315 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 ZNRF4Q8WWF5 429 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 SLITRK2Q9H156 845 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 MED4Q9NPJ6 270 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 ERVK-18Q9QC07 812 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 N6AMT1Q9Y5N5 214 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 CDH10Q9Y6N8 788 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 CMYA5Q8N3K9 4069 aa17.5■□□□□ 0.39
COL9A3-207ENST00000467819 FAM181BA6NEQ2 426 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 SRRM5B3KS81 715 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 GMDSO60547 372 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 CFHR2P36980 270 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 NPY4RP50391 375 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 PRKXP51817 358 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 SAMD4BQ5PRF9 694 aaKnown RBP17.49■□□□□ 0.39
COL9A3-207ENST00000467819 DCXRQ7Z4W1 244 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 OR9Q2Q8NGE9 314 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 OR9Q1Q8NGQ5 310 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 OR2T4Q8NH00 348 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 COPS4Q9BT78 406 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 PRDM13Q9H4Q3 707 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 IL1RAPQ9NPH3 570 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 C1orf123Q9NWV4 160 aa17.49■□□□□ 0.39
COL9A3-207ENST00000467819 A6NLC8 198 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 ZNF879B4DU55 563 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 BHLHE40O14503 412 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 TOX4O94842 621 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 GRPP07492 148 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 SLC2A1P11166 492 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 OTX1P32242 354 aaPredicted RBP17.48■□□□□ 0.39
COL9A3-207ENST00000467819 CD276Q5ZPR3 534 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 FIP1L1Q6UN15 594 aaKnown RBP17.48■□□□□ 0.39
COL9A3-207ENST00000467819 DRAM2Q6UX65 266 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 CDRT15Q96T59 188 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 RASSF4Q9H2L5 321 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 SMURF1Q9HCE7 757 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 KIF17Q9P2E2 1029 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 CD300AQ9UGN4 299 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 COMMD3-BMI1R4GMX3 469 aa17.48■□□□□ 0.39
COL9A3-207ENST00000467819 OOEPA6NGQ2 149 aa17.47■□□□□ 0.39
COL9A3-207ENST00000467819 P2RY10O00398 339 aa17.47■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms