RNA–Protein interactions for RNA: ENST00000465877.1

COL5A1-206, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 583 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-206ENST00000465877 HOXB4P17483 251 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-206ENST00000465877 TMEM33P57088 247 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 ZNF121P58317 390 aaPredicted RBP10.93□□□□□ -0.66
COL5A1-206ENST00000465877 PSMA6P60900 246 aaKnown RBP10.93□□□□□ -0.66
COL5A1-206ENST00000465877 ZNF92Q03936 586 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 AVPI1Q5T686 147 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 SLC16A9Q7RTY1 509 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 GID4Q8IVV7 300 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 C10orf67Q8IYJ2 551 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 PQLC1Q8N2U9 271 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 OR13G1Q8NGZ3 307 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 ITLN1Q8WWA0 313 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 IL4I1Q96RQ9 567 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 TEAD3Q99594 435 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 SLC30A2Q9BRI3 323 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 SOX7Q9BT81 388 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 OPA3Q9H6K4 179 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 YAE1D1Q9NRH1 226 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 TREM2Q9NZC2 230 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 IL19Q9UHD0 177 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 LAMP5Q9UJQ1 280 aa10.93□□□□□ -0.66
COL5A1-206ENST00000465877 A0A1B0GWJ7 208 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 A8MV72 311 aaPredicted RBP10.92□□□□□ -0.66
COL5A1-206ENST00000465877 WNT9BO14905 357 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 TBX1O43435 398 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 APOC1P02654 83 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 TNFRSF1AP19438 455 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 POLR2IP36954 125 aaKnown RBP10.92□□□□□ -0.66
COL5A1-206ENST00000465877 ALDH3A2P51648 485 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 RAD23AP54725 363 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 EFNB1P98172 346 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 HNRNPA0Q13151 305 aaKnown RBP10.92□□□□□ -0.66
COL5A1-206ENST00000465877 TIGD6Q17RP2 521 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 AADACL4Q5VUY2 407 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 CYB5R2Q6BCY4 276 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 PRSS45Q7RTY3 260 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 CBR4Q8N4T8 237 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 RFLNBQ8N5W9 214 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 CLDND2Q8NHS1 167 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 FAM81AQ8TBF8 368 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 THEM6Q8WUY1 208 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 CCL17Q92583 94 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 HPS1Q92902 700 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 MSI2Q96DH6 328 aaKnown RBP10.92□□□□□ -0.66
COL5A1-206ENST00000465877 POM121Q96HA1 1249 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 ADAT1Q9BUB4 502 aaKnown RBP10.92□□□□□ -0.66
COL5A1-206ENST00000465877 TTTY10Q9BZA0 68 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 YIPF3Q9GZM5 350 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 ADGRL4Q9HBW9 690 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 WIPI2Q9Y4P8 454 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 LRP12Q9Y561 859 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 N6AMT1Q9Y5N5 214 aa10.92□□□□□ -0.66
COL5A1-206ENST00000465877 CD300LBA8K4G0 201 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 H0YL77 283 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 ALOX5APP20292 161 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 MMP16P51512 607 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 CDC42P60953 191 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 MVKQ03426 396 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 SLC3A1Q07837 685 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 GFOD2Q3B7J2 385 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 FAM166AQ6J272 317 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 FAM57BQ71RH2 274 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 MEPCEQ7L2J0 689 aaKnown RBP10.91□□□□□ -0.66
COL5A1-206ENST00000465877 HIST2H2ABQ8IUE6 130 aaPredicted RBP10.91□□□□□ -0.66
COL5A1-206ENST00000465877 OR56B2PQ8NGI1 322 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 SPRYD4Q8WW59 207 aaPredicted RBP10.91□□□□□ -0.66
COL5A1-206ENST00000465877 STMN2Q93045 179 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 SPSB4Q96A44 273 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 TIMD4Q96H15 378 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 MEGF10Q96KG7 1140 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 C9orf16Q9BUW7 83 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 REPIN1Q9BWE0 567 aaKnown RBP10.91□□□□□ -0.66
COL5A1-206ENST00000465877 SP140LQ9H930 580 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 BRD7Q9NPI1 651 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 DCAF16Q9NXF7 216 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 COPS3Q9UNS2 423 aa10.91□□□□□ -0.66
COL5A1-206ENST00000465877 hCG_38984A0A1B0GV85 526 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 GGT3PA6NGU5 568 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 PRR32B1ATL7 298 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 F5H5P2 479 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 HLA-DPB1P04440 258 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 SRP9P49458 86 aaKnown RBP10.9□□□□□ -0.66
COL5A1-206ENST00000465877 HCCSP53701 268 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 CDH15P55291 814 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 ZSCAN26Q16670 478 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 KCTD18Q6PI47 426 aaPredicted RBP10.9□□□□□ -0.66
COL5A1-206ENST00000465877 KRT77Q7Z794 578 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 SLC35F2Q8IXU6 374 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 OR52H1Q8NGJ2 320 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 OR51G2Q8NGK0 314 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 OR8J1Q8NGP2 316 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 RAB1CQ92928 201 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 REEP6Q96HR9 211 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 PGAM5Q96HS1 289 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 SIGLEC11Q96RL6 698 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 NIPAL2Q9H841 368 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 GCM1Q9NP62 436 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 TMEM106BQ9NUM4 274 aa10.9□□□□□ -0.66
COL5A1-206ENST00000465877 TMEM100Q9NV29 134 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms