RNA–Protein interactions for RNA: ENST00000463631.1

HMGN1-209, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 583 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-209ENST00000463631 ZSCAN2Q7Z7L9 614 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 CYP4Z1Q86W10 505 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 SPRYD4Q8WW59 207 aaPredicted RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 LHX4Q969G2 390 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 SLCO4A1Q96BD0 722 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 ADAT1Q9BUB4 502 aaKnown RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 DPAGT1Q9H3H5 408 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 PNRC2Q9NPJ4 139 aaKnown RBP14.27□□□□□ -0.13
HMGN1-209ENST00000463631 SAR1AQ9NR31 198 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 CMTM6Q9NX76 183 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 CYB5R1Q9UHQ9 305 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 B9D1Q9UPM9 204 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 ENPP4Q9Y6X5 453 aa14.27□□□□□ -0.13
HMGN1-209ENST00000463631 C5orf63A6NC05 138 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 CD300LBA8K4G0 201 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 C3orf80F5H4A9 247 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 F5H5K5 113 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 CXCR6O00574 342 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 FCN3O75636 299 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 LCATP04180 440 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 H1F0P07305 194 aaKnown RBP14.26□□□□□ -0.13
HMGN1-209ENST00000463631 CA6P23280 308 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 MDH1P40925 334 aaKnown RBP14.26□□□□□ -0.13
HMGN1-209ENST00000463631 OR8B8Q15620 311 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 METAP1DQ6UB28 335 aaPredicted RBP14.26□□□□□ -0.13
HMGN1-209ENST00000463631 MRPL21Q7Z2W9 205 aaKnown RBP14.26□□□□□ -0.13
HMGN1-209ENST00000463631 C1QL4Q86Z23 238 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 OR6V1Q8N148 313 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 PIP4P2Q8N4L2 257 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 SCCPDHQ8NBX0 429 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 DMRTB1Q96MA1 342 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 PITX2Q99697 317 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 KAAG1Q9UBP8 84 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 KPTNQ9Y664 436 aa14.26□□□□□ -0.13
HMGN1-209ENST00000463631 A0A1B0GVI7 797 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 ARPC3O15145 178 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 TSPAN9O75954 239 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 GGT2P36268 569 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 CENPAP49450 140 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 TPTEP56180 551 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 SLC36A3Q495N2 470 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 CDONQ4KMG0 1287 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 FBLN7Q53RD9 439 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 SMARCD3Q6STE5 483 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 FKBP9P1Q75LS8 142 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 BTN2A1Q7KYR7 527 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 ZBTB46Q86UZ6 589 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 FAM90A1Q86YD7 464 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 LINC00346Q8IVM7 164 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 SLC15A3Q8IY34 581 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 MRPL15Q9P015 296 aaKnown RBP14.25□□□□□ -0.13
HMGN1-209ENST00000463631 ZNRD1Q9P1U0 126 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 GMPR2Q9P2T1 348 aaKnown RBP14.25□□□□□ -0.13
HMGN1-209ENST00000463631 RPUSD1Q9UJJ7 312 aaKnown RBP14.25□□□□□ -0.13
HMGN1-209ENST00000463631 VPREB3Q9UKI3 123 aa14.25□□□□□ -0.13
HMGN1-209ENST00000463631 TET2Q6N021 2002 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 LOC100653049A0A140TA62 436 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 UNC119BA6NIH7 251 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 M0R135 149 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 DVL1O14640 695 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 OR10H3O60404 316 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 KRT34O76011 436 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 SERPINA1P01009 418 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 OTX1P32242 354 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 ARF6P62330 175 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 LIPEQ05469 1076 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 FGD3Q5JSP0 725 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 TEX36Q5VZQ5 186 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 DHRS7BQ6IAN0 325 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 NAA40Q86UY6 237 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 GCSAMQ8N6F7 178 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 BOLLQ8N9W6 283 aaKnown RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 SPERTQ8NA61 448 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 OR2AJ1Q8NGZ0 328 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 NPRL2Q8WTW4 380 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 ZNF799Q96GE5 643 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 ERMAPQ96PL5 475 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 KRCC1Q9NPI7 259 aaPredicted RBP14.24□□□□□ -0.13
HMGN1-209ENST00000463631 KCNG2Q9UJ96 466 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 AURKCQ9UQB9 309 aa14.24□□□□□ -0.13
HMGN1-209ENST00000463631 NOTCH3Q9UM47 2321 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 NME4O00746 187 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 SLC22A2O15244 555 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 LHBP01229 141 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 FBP1P09467 338 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 ZNF92Q03936 586 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 SEC23BQ15437 767 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 KPRPQ5T749 579 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-209ENST00000463631 VMO1Q7Z5L0 202 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 FAM110DQ8TAY7 271 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-209ENST00000463631 FANK1Q8TC84 345 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 RCN3Q96D15 328 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 MAP6Q96JE9 813 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 DHRS1Q96LJ7 313 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 NMNAT3Q96T66 252 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 FUZQ9BT04 418 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 C1orf123Q9NWV4 160 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 NDUFAF4Q9P032 175 aa14.23□□□□□ -0.13
HMGN1-209ENST00000463631 CAB39Q9Y376 341 aaPredicted RBP14.23□□□□□ -0.13
HMGN1-209ENST00000463631 FAM96BQ9Y3D0 163 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms