RNA–Protein interactions for RNA: ENST00000454591.6

ECHDC1-209, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 2 BASIC

Gene ECHDC1, Length 1,515 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-209ENST00000454591 KCNG3Q8TAE7 436 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SAP25Q8TEE9 199 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 RASL10BQ96S79 203 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 MESP1Q9BRJ9 268 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 CRB3Q9BUF7 120 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 LPAR5Q9H1C0 372 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SHPKQ9UHJ6 478 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 ATXN7L1Q9ULK2 861 aaPredicted RBP11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 SESN1Q9Y6P5 492 aa11.09□□□□□ -0.63
ECHDC1-209ENST00000454591 A0A1B0GW55 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 C9orf170A2RU37 121 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DBX1A6NMT0 343 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 TP53I11O14683 189 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 YKT6O15498 198 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 TLX3O43711 291 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 SSX5O60225 188 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CA11O75493 328 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 OR2J2O76002 312 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L2P0CJ85 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L3P0CJ86 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L4P0CJ87 422 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L5P0CJ88 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L6P0CJ89 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4L7P0CJ90 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF20P17024 532 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 POU3F2P20265 443 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 GNALP38405 381 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CBX5P45973 191 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CXADRP78310 365 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 GABREP78334 506 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 H3F3AP84243 136 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 PCOLCEQ15113 449 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 LIN54Q6MZP7 749 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 C11orf87Q6NUJ2 197 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 GUSBP11Q6P575 273 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CHMP1BQ7LBR1 199 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 HOGA1Q86XE5 327 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 PPP1R3BQ86XI6 285 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 BEST3Q8N1M1 668 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 FAM89BQ8N5H3 189 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 OR8B12Q8NGG6 310 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 NAT6Q93015 286 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 OCSTAMPQ9BR26 566 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 EMC6Q9BV81 110 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 B3GNT4Q9C0J1 378 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 PTGES2Q9H7Z7 377 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 DUX4Q9UBX2 424 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 PFDN2Q9UHV9 154 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 GLS2Q9UI32 602 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CHCHD2Q9Y6H1 151 aaPredicted RBP11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 CEP290O15078 2479 aa11.08□□□□□ -0.64
ECHDC1-209ENST00000454591 A0A0U1RQV5 110 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 LOC105371267A0A1B0GV96 52 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 OR5H14A6NHG9 310 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 EFSO43281 561 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 STK17BO94768 372 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 DUS4LO95620 317 aaKnown RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 HPP00738 406 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF17P17021 662 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF93P35789 620 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 SUCLG1P53597 346 aaKnown RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 FOXL2P58012 376 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 OC90Q02509 493 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 IL11RAQ14626 422 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 TMPPEQ6ZT21 453 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF546Q86UE3 836 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 PDZD9Q8IXQ8 264 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ARMC10Q8N2F6 343 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ARRDC1Q8N5I2 433 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 WDSUB1Q8N9V3 476 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM185AQ8NFB2 350 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 OR1S1Q8NH92 325 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 OR51E1Q8TCB6 317 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 THAP3Q8WTV1 239 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 TMEM54Q969K7 222 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 FBXW5Q969U6 566 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 PMEPA1Q969W9 287 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 C10orf35Q96D05 121 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 CCDC74BQ96LY2 380 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 NKX3-1Q99801 234 aaPredicted RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 DEFB126Q9BYW3 111 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 CST11Q9H112 138 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 PPA2Q9H2U2 334 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 PRO3102Q9H379 93 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 RASL12Q9NYN1 266 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF224Q9NZL3 707 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 FBXL2Q9UKC9 423 aa11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 MRPS28Q9Y2Q9 187 aaKnown RBP11.07□□□□□ -0.64
ECHDC1-209ENST00000454591 CACNA1EQ15878 2313 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 TRBV6-7A0A0A0MS04 114 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 FOXI3A8MTJ6 420 aaPredicted RBP11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 SHISA8B8ZZ34 492 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 BCL2L11O43521 198 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 VAMP5O95183 116 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 HLA-AP01891 365 aaKnown RBP11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 HIST1H1DP16402 221 aaKnown RBP11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF43P17038 809 aa11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 OTX1P32242 354 aaPredicted RBP11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 ZNF121P58317 390 aaPredicted RBP11.06□□□□□ -0.64
ECHDC1-209ENST00000454591 FAM69BQ5VUD6 431 aa11.06□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53 ms