RNA–Protein interactions for RNA: ENST00000447124.1

SDC1-205, Transcript of syndecan 1, humanhuman

TSL 4

Gene SDC1, Length 591 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-205ENST00000447124 BAIAP2Q9UQB8 552 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 AUP1Q9Y679 476 aa17.37■□□□□ 0.37
SDC1-205ENST00000447124 FMO3P31513 532 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 CD80P33681 288 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 CD200P41217 278 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 ENTPD1P49961 510 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 PRKXP51817 358 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 MPPED2Q15777 294 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 TEX30Q5JUR7 227 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 GLYATL3Q5SZD4 288 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 PRAMEF6Q5VXH4 476 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 CD300LDQ6UXZ3 194 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 TMEM179BQ7Z7N9 219 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 KLBQ86Z14 1044 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 ADGRG5Q8IZF4 528 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 OR2T33Q8NG76 320 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 OR10G2Q8NGC3 310 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 SPRYD4Q8WW59 207 aaPredicted RBP17.36■□□□□ 0.37
SDC1-205ENST00000447124 POP5Q969H6 163 aaKnown RBP17.36■□□□□ 0.37
SDC1-205ENST00000447124 CHID1Q9BWS9 393 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 SUCNR1Q9BXA5 334 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 CENPMQ9NSP4 180 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 ZNF69Q9UC07 566 aa17.36■□□□□ 0.37
SDC1-205ENST00000447124 PRPF19Q9UMS4 504 aaKnown RBP17.36■□□□□ 0.37
SDC1-205ENST00000447124 FSTL3O95633 263 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 SPARCP09486 303 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 SLC2A1P11166 492 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 CA6P23280 308 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 ZNF404Q494X3 552 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 ESCO2Q56NI9 601 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 DRAM2Q6UX65 266 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 LYPD2Q6UXB3 125 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 C12orf54Q6X4T0 127 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 MRPL21Q7Z2W9 205 aaKnown RBP17.35■□□□□ 0.37
SDC1-205ENST00000447124 BCL6BQ8N143 479 aaPredicted RBP17.35■□□□□ 0.37
SDC1-205ENST00000447124 BPIFB2Q8N4F0 458 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 CELF2-AS1Q8N7Q2 184 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 C19orf18Q8NEA5 215 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 Q8TCH9 128 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 SLAMF6Q96DU3 332 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 ASB9Q96DX5 294 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 FEVQ99581 238 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 MED20Q9H944 212 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 UFSP2Q9NUQ7 469 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 PPIAL4AQ9Y536 164 aa17.35■□□□□ 0.37
SDC1-205ENST00000447124 TMEM89A2RUT3 159 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 TRIM77I1YAP6 450 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 HAX1O00165 279 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 FAM20BO75063 409 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 RAP2AP10114 183 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 SPATC1Q76KD6 591 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 IQCF1Q8N6M8 205 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 GIPC3Q8TF64 312 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 DACT3Q96B18 629 aaPredicted RBP17.34■□□□□ 0.37
SDC1-205ENST00000447124 CCDC124Q96CT7 223 aaKnown RBP17.34■□□□□ 0.37
SDC1-205ENST00000447124 KCNJ15Q99712 375 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 COPS4Q9BT78 406 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 THTPAQ9BU02 230 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 SSBP3Q9BWW4 388 aaPredicted RBP17.34■□□□□ 0.37
SDC1-205ENST00000447124 C1orf21Q9H246 121 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 CMC2Q9NRP2 79 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 MIOXQ9UGB7 285 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 LRCH1Q9Y2L9 728 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 N6AMT1Q9Y5N5 214 aa17.34■□□□□ 0.37
SDC1-205ENST00000447124 FAM183AA6NL82 134 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 LRRC30A6NM36 301 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 RPS2P15880 293 aaKnown RBP17.33■□□□□ 0.36
SDC1-205ENST00000447124 CPT2P23786 658 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 FPR2P25090 351 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 CFPP27918 469 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 OR8G1Q15617 311 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 CANT1Q8WVQ1 401 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 ERGIC1Q969X5 290 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 NEIL1Q96FI4 390 aaPredicted RBP17.33■□□□□ 0.36
SDC1-205ENST00000447124 JMJD8Q96S16 334 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 OR5V1Q9UGF6 321 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 NUP50Q9UKX7 468 aa17.33■□□□□ 0.36
SDC1-205ENST00000447124 SOX21Q9Y651 276 aaPredicted RBP17.33■□□□□ 0.36
SDC1-205ENST00000447124 DHRS12A0PJE2 317 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 GGT3PA6NGU5 568 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 PTBP3O95758 552 aaKnown RBP17.32■□□□□ 0.36
SDC1-205ENST00000447124 CST1P01037 141 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 COMPP49747 757 aaPredicted RBP17.32■□□□□ 0.36
SDC1-205ENST00000447124 TAF13Q15543 124 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 ZNF841Q6ZN19 808 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 C1orf87Q8N0U7 546 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 SIGLECL1Q8N7X8 197 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 OR6K6Q8NGW6 343 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 RAB40AQ8WXH6 277 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 LRGUKQ96M69 825 aa17.32■□□□□ 0.36
SDC1-205ENST00000447124 TNFRSF13BO14836 293 aaPredicted RBP17.31■□□□□ 0.36
SDC1-205ENST00000447124 GMDSO60547 372 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 IFNGP01579 166 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 GRK5P34947 590 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 GNB2P62879 340 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 ARMCX4Q5H9R4 360 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 GCDHQ92947 438 aaPredicted RBP17.31■□□□□ 0.36
SDC1-205ENST00000447124 SPSB4Q96A44 273 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 SGK3Q96BR1 496 aa17.31■□□□□ 0.36
SDC1-205ENST00000447124 ZNF48Q96MX3 618 aaPredicted RBP17.31■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms