RNA–Protein interactions for RNA: ENST00000406327.2

HMGB3P18-201, Transcript of high mobility group box 3 pseudogene 18, humanhuman

BASIC

Gene HMGB3P18, Length 590 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P18-201ENST00000406327 OR2J3O76001 311 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 KRT34O76011 436 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 WISP3O95389 354 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PSMG1O95456 288 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 C1orf105O95561 183 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 HSPB1P04792 205 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 RPSAP08865 295 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 RBP1P09455 135 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 THRAP10827 490 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF43P17038 809 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 CXCR2P25025 360 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR1E1P30953 314 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ATP5C1P36542 298 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 SERPINB5P36952 375 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC26A3P40879 764 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 SLC1A2P43004 574 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TFPI2P48307 235 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 GSSP48637 474 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TUFMP49411 452 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 DLX1P56177 255 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TAS2R39P59534 338 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 DNAJB13P59910 316 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 GNA12Q03113 381 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ACVR1Q04771 509 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM83EQ2M2I3 478 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TRMT5Q32P41 509 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ACSBG2Q5FVE4 666 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 C1orf100Q5SVJ3 147 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 C1orf185Q5T7R7 199 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF470Q6ECI4 717 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TRIM40Q6P9F5 258 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 C19orf35Q6ZS72 473 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 CD177Q8N6Q3 437 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 NKAPP1Q8N9T2 125 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR2G2Q8NGZ5 317 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PLPPR1Q8TBJ4 325 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PDCD6IPQ8WUM4 868 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 ACOT11Q8WXI4 607 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 SMARCD2Q92925 531 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PEX13Q92968 403 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 CMTM5Q96DZ9 223 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 MRPL57Q9BQC6 102 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PELOQ9BRX2 385 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 THTPAQ9BU02 230 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAIM2Q9BWQ8 316 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 C20orf85Q9H1P6 137 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 MFSD1Q9H3U5 465 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 GEMIN7Q9H840 131 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 PDFQ9HBH1 243 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 INPP5EQ9NRR6 644 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 AIG1Q9NVV5 245 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM9Q9P0T7 183 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 STX18Q9P2W9 335 aaKnown RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 UXTQ9UBK9 157 aaPredicted RBP3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 VSIG4Q9Y279 399 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 MCM3APO60318 1980 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 RALGAPA2Q2PPJ7 1873 aa3.5□□□□□ -1.85
HMGB3P18-201ENST00000406327 SCN1AP35498 2009 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 RALGAPA1Q6GYQ0 2036 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 IGKV1D-8A0A087WSZ0 117 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 A0A0D9SEW6 157 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR51F1A6NGY5 319 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 EPOPA6NHQ4 379 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 TRPC5OSA6NMA1 111 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 VGLL3A8MV65 326 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 F5H5T6 163 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 COCHO43405 550 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 KDELR3O43731 214 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CLDN11O75508 207 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CTAG2O75638 210 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 GAS8-AS1O95177 125 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 P0C879 139 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 COX4I1P13073 169 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 HOXB8P17481 243 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ATF6P18850 670 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 COX7A1P24310 79 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CDKN2DP55273 166 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 TAS2R19P59542 299 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 IGLV3-21P80748 117 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF235Q14590 738 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CYTH1Q15438 398 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF774Q6NX45 483 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CERS6Q6ZMG9 384 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 Q6ZR54 194 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 PRSS41Q7RTY9 318 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 FAM220AQ7Z4H9 259 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 SETD3Q86TU7 594 aaPredicted RBP3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCNYL1Q8N7R7 359 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ZNF461Q8TAF7 563 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 RHEBL1Q8TAI7 183 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 DNAJC9Q8WXX5 260 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 UCN3Q969E3 161 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 CCDC126Q96EE4 140 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 OR52B2Q96RD2 323 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 TRIB3Q96RU7 358 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 RIOK2Q9BVS4 552 aaKnown RBP3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 TMEM59Q9BXS4 323 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 ROGDIQ9GZN7 287 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 POMKQ9H5K3 350 aa3.49□□□□□ -1.85
HMGB3P18-201ENST00000406327 WDR55Q9H6Y2 383 aaPredicted RBP3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms