RNA–Protein interactions for RNA: ENST00000395066.7

CLK3-202, Transcript of CDC like kinase 3, humanhuman

TSL 1 (best) BASIC

Gene CLK3, Length 2,621 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-202ENST00000395066 ZNF217O75362 1048 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 VSIG8P0DPA2 414 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 TDGQ13569 410 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 MEF2DQ14814 521 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 RAB12Q6IQ22 244 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 ARMC10Q8N2F6 343 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 OR10S1Q8NGN2 331 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 SLAMF6Q96DU3 332 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 PRRT1Q99946 306 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 SELENOIQ9C0D9 397 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 FN3KRPQ9HA64 309 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 SLC22A11Q9NSA0 550 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 FAM206AQ9NX38 181 aa18.34■□□□□ 0.53
CLK3-202ENST00000395066 A0A0A6YYH2 397 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 LOC390937A0A1W2PQ73 354 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 MEGF11A6BM72 1044 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 A6NJ64 397 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 EEF1E1-BLOC1S5C9J1V9 151 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 PMP2P02689 132 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 ISG15P05161 165 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 ADCYAP1P18509 176 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 COL5A1P20908 1838 aaPredicted RBP18.33■□□□□ 0.53
CLK3-202ENST00000395066 SCRN3Q0VDG4 424 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 ZNF704Q6ZNC4 412 aaPredicted RBP18.33■□□□□ 0.53
CLK3-202ENST00000395066 H1FNTQ75WM6 255 aaPredicted RBP18.33■□□□□ 0.53
CLK3-202ENST00000395066 SYT13Q7L8C5 426 aa18.33■□□□□ 0.53
CLK3-202ENST00000395066 SYT7O43581 403 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 CD37P11049 281 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 CDAP32320 146 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 COX15Q7KZN9 410 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 MITD1Q8WV92 249 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 MVB12AQ96EY5 273 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 PHB2Q99623 299 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 LMAN1LQ9HAT1 526 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 SLC2A4RGQ9NR83 387 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 SLC2A8Q9NY64 477 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 PRR13Q9NZ81 148 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 MBD2Q9UBB5 411 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 ARID1AO14497 2285 aa18.33■□□□□ 0.52
CLK3-202ENST00000395066 FRYLO94915 3013 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 A0A1B0GX78 115 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 C9orf170A2RU37 121 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 EFNA2O43921 213 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 STK17BO94768 372 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 ABOP16442 354 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 IL13RA1P78552 427 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 TMEM244Q5VVB8 128 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 RNF133Q8WVZ7 376 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 ADAT1Q9BUB4 502 aaKnown RBP18.32■□□□□ 0.52
CLK3-202ENST00000395066 PBOV1Q9GZY1 135 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 FGF21Q9NSA1 209 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 CPED1A4D0V7 1026 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 METTL21EPA6NDL7 271 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 METTL12A8MUP2 240 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 IL2RAP01589 272 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 MFAP5Q13361 173 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 RAB30Q15771 203 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 CARD17Q5XLA6 110 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 RAB11FIP2Q7L804 512 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 COMMD2Q86X83 199 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 CBLN2Q8IUK8 224 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 OR5AP2Q8NGF4 316 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 OR51E1Q8TCB6 317 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 SEC61A2Q9H9S3 476 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 CA14Q9ULX7 337 aa18.32■□□□□ 0.52
CLK3-202ENST00000395066 DMDP11532 3685 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 A0A1W2PP11 408 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 FGF16O43320 207 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 ERCC1P07992 297 aaPredicted RBP18.31■□□□□ 0.52
CLK3-202ENST00000395066 PVALBP20472 110 aaPredicted RBP18.31■□□□□ 0.52
CLK3-202ENST00000395066 B2MP61769 119 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 GFOD2Q3B7J2 385 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 TMPPEQ6ZT21 453 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 GTPBP8Q8N3Z3 284 aaPredicted RBP18.31■□□□□ 0.52
CLK3-202ENST00000395066 SLC38A9Q8NBW4 561 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 OR1M1Q8NGA1 313 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 RAB22AQ9UL26 194 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 AWAT2Q6E213 333 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 APCDD1LQ8NCL9 501 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 STT3BQ8TCJ2 826 aa18.31■□□□□ 0.52
CLK3-202ENST00000395066 ZNF629Q9UEG4 869 aaPredicted RBP18.31■□□□□ 0.52
CLK3-202ENST00000395066 RALGAPA1Q6GYQ0 2036 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 C13orf42A0A1B0GVH6 325 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 A6NIZ1 184 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 SSX5O60225 188 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 DAP3P51398 398 aaKnown RBP18.3■□□□□ 0.52
CLK3-202ENST00000395066 RAP1BP61224 184 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 HNRNPKP61978 463 aaKnown RBP eCLIP18.3■□□□□ 0.52
CLK3-202ENST00000395066 RAP1AP62834 184 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 PCK2Q16822 640 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 DNM1P34Q6PK57 102 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 ANGPTL5Q86XS5 388 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 ZNF101Q8IZC7 436 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 D2HGDHQ8N465 521 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 NKAIN3Q8N8D7 197 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 ZDHHC22Q8N966 263 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 TMEM104Q8NE00 496 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 OR10H5Q8NGA6 315 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 PAQR8Q8TEZ7 354 aa18.3■□□□□ 0.52
CLK3-202ENST00000395066 TMEM234Q8WY98 164 aa18.3■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 54.1 ms