RNA–Protein interactions for RNA: ENST00000392449.4

PTPRK-208, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 2

Gene PTPRK, Length 1,456 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-208ENST00000392449 LRRC30A6NM36 301 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 SOX14O95416 240 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 PRTN3P24158 256 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 GATA4P43694 442 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 PITPNBP48739 271 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 BAMBIQ13145 260 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 OR8G1Q15617 311 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 GLYATL3Q5SZD4 288 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 SFRP4Q6FHJ7 346 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-208ENST00000392449 C16orf89Q6UX73 402 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 SPATC1Q76KD6 591 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 DCXRQ7Z4W1 244 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 LNX2Q8N448 690 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 ZNF511Q8NB15 262 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 OR8B3Q8NGG8 313 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 OR4Q3Q8NH05 313 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 RAB40AQ8WXH6 277 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 OR8B2Q96RD0 313 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 KRTAP3-3Q9BYR6 98 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 KRTAP3-2Q9BYR7 98 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 MS4A7Q9GZW8 240 aaPredicted RBP13.83□□□□□ -0.2
PTPRK-208ENST00000392449 TBC1D23Q9NUY8 699 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 ARMC1Q9NVT9 282 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 ARL2BPQ9Y2Y0 163 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 U3KQV3 271 aa13.83□□□□□ -0.2
PTPRK-208ENST00000392449 TCRBV5S2A0A599 114 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 CD300LBA8K4G0 201 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 C22orf46C9J442 243 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 SPRY1O43609 319 aaPredicted RBP13.82□□□□□ -0.2
PTPRK-208ENST00000392449 SPARCP09486 303 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 HKR1P10072 659 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 CD200P41217 278 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 PRKXP51817 358 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 HMGA2P52926 109 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 CRMP1Q14194 572 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 BTNL3Q6UXE8 466 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 ZNF841Q6ZN19 808 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 PIGWQ7Z7B1 504 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 C1orf87Q8N0U7 546 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 AQP11Q8NBQ7 271 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 Q8TCH9 128 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 SPTSSAQ969W0 71 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 UPRTQ96BW1 309 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 ADAT1Q9BUB4 502 aaKnown RBP13.82□□□□□ -0.2
PTPRK-208ENST00000392449 IL20Q9NYY1 176 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 CTSZQ9UBR2 303 aa13.82□□□□□ -0.2
PTPRK-208ENST00000392449 C3orf80F5H4A9 247 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 ATP8B1O43520 1251 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 KRT36O76013 467 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 CCNB2O95067 398 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 IRF2P14316 349 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 OTX1P32242 354 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-208ENST00000392449 WDR25Q64LD2 544 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-208ENST00000392449 LRRN1Q6UXK5 716 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 BRD3OSQ6XYD6 125 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 NLRC3Q7RTR2 1065 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 OR2T4Q8NH00 348 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 PLEKHA8Q96JA3 519 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 NUDT16L1Q9BRJ7 211 aaKnown RBP13.81□□□□□ -0.2
PTPRK-208ENST00000392449 COPS4Q9BT78 406 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 TSSK6Q9BXA6 273 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 MMADHCQ9H3L0 296 aaPredicted RBP13.81□□□□□ -0.2
PTPRK-208ENST00000392449 CENPMQ9NSP4 180 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 CLN8Q9UBY8 286 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 KCNG2Q9UJ96 466 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 PKD1L1Q8TDX9 2849 aa13.81□□□□□ -0.2
PTPRK-208ENST00000392449 GGT3PA6NGU5 568 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 PLATP00750 562 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 MAGEA2P43356 314 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 FGF12P61328 243 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 SLC9A3R2Q15599 337 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 DCDC5Q6ZRR9 648 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 ZNF826PQ6ZT77 177 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 RASSF6Q6ZTQ3 369 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 FITM2Q8N6M3 262 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 CELF2-AS1Q8N7Q2 184 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 OR11L1Q8NGX0 322 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 SLAMF6Q96DU3 332 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 TRIM15Q9C019 465 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 ACTR3BQ9P1U1 418 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 MGAM2Q2M2H8 2515 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 TRRAPQ9Y4A5 3859 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 KIR2DS1A0A191URI9 304 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 DCTN3O75935 186 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 SPI1P17947 270 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 PSMB10P40306 273 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 MS4A2Q01362 244 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 POU4F2Q12837 409 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 RUSC1-AS1Q66K80 236 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 RPL13AP3Q6NVV1 102 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 OR56B2PQ8NGI1 322 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 OR6K6Q8NGW6 343 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 ZMYND19Q96E35 227 aaPredicted RBP13.8□□□□□ -0.2
PTPRK-208ENST00000392449 TECTBQ96PL2 329 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 NMNAT2Q9BZQ4 307 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 RASSF4Q9H2L5 321 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 PPP1R3EQ9H7J1 279 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 MED20Q9H944 212 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 SMURF1Q9HCE7 757 aa13.8□□□□□ -0.2
PTPRK-208ENST00000392449 B2RBV5 119 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms