RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 NCF4Q15080 339 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 CCDC183Q5T5S1 534 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 CASP12Q6UXS9 341 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 BZW1Q7L1Q6 419 aaKnown RBP1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 LUZP2Q86TE4 346 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 MDP1Q86V88 176 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 ERO1BQ86YB8 467 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 GABRG1Q8N1C3 465 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 JAGN1Q8N5M9 183 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 SLC35G3Q8N808 338 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 OR4M1Q8NGD0 313 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 OR1J4Q8NGS1 313 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 KLF14Q8TD94 323 aaPredicted RBP1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 IP6K3Q96PC2 410 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 CALN1Q9BXU9 219 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 NEUROG2Q9H2A3 272 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 CLN6Q9NWW5 311 aa1.39□□□□□ -2.19
RNU6-48P-201ENST00000384161 SIGLEC1Q9BZZ2 1709 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 BRCA1P38398 1863 aaKnown RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 A0A075B6Q4 140 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 IGKV3D-11A0A0A0MRZ8 115 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 KBTBD11-OT1A0A1B0GTJ5 212 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 A0A1B0GW55 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 TMEM120BA0PK00 339 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 BTNL10A8MVZ5 291 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 K7EMT4 169 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 M0R3G1 203 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 POLR1CO15160 346 aaPredicted RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 CACNG3O60359 315 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RAD1O60671 282 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 CDH16O75309 829 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 GATBO75879 557 aaKnown RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 GLAP06280 429 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4L2P0CJ85 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4L3P0CJ86 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4L5P0CJ88 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4L6P0CJ89 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4L7P0CJ90 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RAB4AP20338 218 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 STOMP27105 288 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 PFN2P35080 140 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 MPV17P39210 176 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 CRISP1P54107 249 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RPS15P62841 145 aaKnown RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 MERTKQ12866 999 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RCN1Q15293 331 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 PRAMEF20Q5VT98 475 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 STUMQ69YW2 141 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 C12orf54Q6X4T0 127 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 TMPRSS11AQ6ZMR5 421 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RTL4Q6ZR62 310 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 CBLN2Q8IUK8 224 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 BBS5Q8N3I7 341 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 LINC00304Q8N9R0 145 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 C19orf18Q8NEA5 215 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 OR5T1Q8NG75 326 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RNF145Q96MT1 663 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 COL21A1Q96P44 957 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 GPR21Q99679 349 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 SLIRPQ9GZT3 109 aaKnown RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 ZSCAN16Q9H4T2 348 aaPredicted RBP1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 TMEM38AQ9H6F2 299 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 ANKRA2Q9H9E1 313 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 RAB20Q9NX57 234 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 SLC17A7Q9P2U7 560 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 DUX4Q9UBX2 424 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 CLN8Q9UBY8 286 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 C2orf16Q68DN1 1984 aa1.38□□□□□ -2.19
RNU6-48P-201ENST00000384161 SEC16AO15027 2179 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 KCNE1BA0A087WTH5 132 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 IGKV2-24A0A0C4DH68 120 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 TSPAN11A1L157 253 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CTAGE15A4D2H0 777 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 ZNF233A6NK53 670 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CENPBD1B2RD01 187 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 NDUFC2-KCTD14E9PQ53 114 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 PLPP1O14494 284 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 EIF3HO15372 352 aaKnown RBP eCLIP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 ERLIN1O75477 346 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 SCO1O75880 301 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 MT-ND4P03905 459 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 ERCC1P07992 297 aaPredicted RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CSNK2A2P19784 350 aaPredicted RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 USF1P22415 310 aaPredicted RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 LOXP28300 417 aaPredicted RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 RAB9AP51151 201 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 IFITM3Q01628 133 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CYP24A1Q07973 514 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 ZNF266Q14584 549 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 MAD2L1BPQ15013 274 aaPredicted RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 TWF2Q6IBS0 349 aaKnown RBP1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CD300LGQ6UXG3 332 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 CTAGE6Q86UF2 777 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 HORMAD1Q86X24 394 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 TMEM104Q8NE00 496 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 BPIFCQ8NFQ6 507 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 PRRC1Q96M27 445 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 TEAD3Q99594 435 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 TMEM243Q9BU79 118 aa1.37□□□□□ -2.19
RNU6-48P-201ENST00000384161 RETNQ9HD89 108 aa1.37□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms