RNA–Protein interactions for RNA: ENST00000378078.4

RGP1-201, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RGP1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-201ENST00000378078 A4GALTQ9NPC4 353 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 C20orf141Q9NUB4 165 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 LRP3O75074 770 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 TRAPPC2P0DI81 140 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 TRAPPC2BP0DI82 140 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 AGERQ15109 404 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 ADAM5Q6NVV9 412 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 GUSBP11Q6P575 273 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 ZNF534Q76KX8 674 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 LSMEM2Q8N112 164 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 HSD17B10Q99714 261 aaKnown RBP14.8□□□□□ -0.04
RGP1-201ENST00000378078 TRGV10A0A0A0MS01 117 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 CD14P08571 375 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 TEX37Q96LM6 180 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 ASB16Q96NS5 453 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 NTN4Q9HB63 628 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 POLDIP2Q9Y2S7 368 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 IGKV6-21A0A0C4DH24 114 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 SRPXP78539 464 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 SYT6Q5T7P8 510 aaPredicted RBP14.8□□□□□ -0.04
RGP1-201ENST00000378078 ATOH8Q96SQ7 321 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 MYOM1P52179 1685 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 OR2B8PP59922 312 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 TMEM81Q6P7N7 255 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 ARRDC2Q8TBH0 407 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 LINC00052Q96N35 136 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 SLC22A13Q9Y226 551 aa14.8□□□□□ -0.04
RGP1-201ENST00000378078 RCL1Q9Y2P8 373 aaKnown RBP14.8□□□□□ -0.04
RGP1-201ENST00000378078 NEURL4Q96JN8 1562 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 FGF17O60258 216 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 KLKB1P03952 638 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ZNF141Q15928 474 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ACOT6Q3I5F7 207 aaPredicted RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 ABHD17CQ6PCB6 329 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 MRGPRX1Q96LB2 322 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 DNAJC25-GNG10A0A024R161 153 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 IGHV3OR16-12A0A075B7B8 117 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 IGKV6D-21A0A0A0MT36 114 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 CDX4O14627 284 aaPredicted RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 TCRBP04435 133 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ARL6IP6Q8N6S5 226 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 OR5H6Q8NGV6 325 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 CNOT2Q9NZN8 540 aaKnown RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 TRGV5A0A0B4J1U4 118 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ZNF716A6NP11 495 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 AGFG2O95081 481 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ZNF239Q16600 458 aaKnown RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 PYCR3Q53H96 274 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 OR2M3Q8NG83 312 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 RPEQ96AT9 228 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 GALMQ96C23 342 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ZPBPQ9BS86 351 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 SLC25A32Q9H2D1 315 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 GAR1Q9NY12 217 aaKnown RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 LRP11Q86VZ4 500 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 PBOV1Q9GZY1 135 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 RNASEK-C17orf49H0YIS7 233 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 FABP4P15090 132 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 USF1P22415 310 aaPredicted RBP14.79□□□□□ -0.04
RGP1-201ENST00000378078 VAMP3Q15836 100 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ZNF260Q3ZCT1 412 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 NUDCD2Q8WVJ2 157 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 ITPKCQ96DU7 683 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 TAAR6Q96RI8 345 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 AP5S1Q9NUS5 200 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 TAAR3PQ9P1P4 343 aa14.79□□□□□ -0.04
RGP1-201ENST00000378078 CCDC187A0A096LP49 1063 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 UMAD1C9J7I0 102 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 NPPBP16860 134 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 KIAA0141Q14154 515 aaPredicted RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 ELAVL1Q15717 326 aaKnown RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 C9orf50Q5SZB4 431 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 VWA1Q6PCB0 445 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 TMEM88Q6PEY1 159 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 ZNF620Q6ZNG0 422 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 FGF14Q92915 247 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 WBP2Q969T9 261 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 ACTR3CQ9C0K3 210 aaPredicted RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 C20orf27Q9GZN8 174 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 XKRY2A2RUG3 117 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 MGPP08493 103 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 PIGPP57054 158 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 TAS2R45P59539 299 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 ZNF528Q3MIS6 628 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 OR52B4Q8NGK2 314 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 OR1B1Q8NGR6 318 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 SCPEP1Q9HB40 452 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 STRAPQ9Y3F4 350 aaKnown RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 UBR2Q8IWV8 1755 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 CBR3O75828 277 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 SCG5P05408 212 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 PSMB1P20618 241 aaKnown RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 CA6P23280 308 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 LYG1Q8N1E2 194 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 GNRHR2Q96P88 292 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 C11orf54Q9H0W9 315 aaPredicted RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 A0A1W2PR48 441 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 ZNF787Q6DD87 383 aa14.78□□□□□ -0.04
RGP1-201ENST00000378078 PLEKHB1Q9UF11 243 aaPredicted RBP14.78□□□□□ -0.04
RGP1-201ENST00000378078 KPTNQ9Y664 436 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms