RNA–Protein interactions for RNA: ENST00000372244.3

TMEM53-205, Transcript of transmembrane protein 53, humanhuman

TSL 2 BASIC

Gene TMEM53, Length 1,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-205ENST00000372244 TIMD4Q96H15 378 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 PKP2Q99959 881 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 NARFLQ9H6Q4 476 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 GCM1Q9NP62 436 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 DCAF16Q9NXF7 216 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 ENOPH1Q9UHY7 261 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 CDC42EP3Q9UKI2 254 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 ATRQ13535 2644 aa16.92■□□□□ 0.3
TMEM53-205ENST00000372244 CCDC182A6NF36 153 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 CD300LBA8K4G0 201 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 B4DSR2 109 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 SLC2A1P11166 492 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 ALOX5APP20292 161 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 POLR2IP36954 125 aaKnown RBP16.91■□□□□ 0.3
TMEM53-205ENST00000372244 GLYATL3Q5SZD4 288 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 OR2AE1Q8NHA4 323 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 TMEM106BQ9NUM4 274 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 KCNS2Q9ULS6 477 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 PPP1R3CQ9UQK1 317 aa16.91■□□□□ 0.3
TMEM53-205ENST00000372244 FAM157AC9JC47 383 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 APOC1P02654 83 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 LYNP07948 512 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 IGFBP5P24593 272 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 RPS7P62081 194 aaKnown RBP16.9■□□□□ 0.3
TMEM53-205ENST00000372244 HNRNPA0Q13151 305 aaKnown RBP16.9■□□□□ 0.3
TMEM53-205ENST00000372244 CHRFAM7AQ494W8 412 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 AADACL4Q5VUY2 407 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 SLC16A9Q7RTY1 509 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 MRPL21Q7Z2W9 205 aaKnown RBP16.9■□□□□ 0.3
TMEM53-205ENST00000372244 C10orf67Q8IYJ2 551 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 OR10AD1Q8NGE0 317 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 THEM6Q8WUY1 208 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 SGK3Q96BR1 496 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 MEGF10Q96KG7 1140 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 PRRG3Q9BZD7 231 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 YIPF3Q9GZM5 350 aa16.9■□□□□ 0.3
TMEM53-205ENST00000372244 HLA-DPB1P04440 258 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 RBMXP38159 391 aaKnown RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 NAA10P41227 235 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 CX3CR1P49238 355 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 SRP9P49458 86 aaKnown RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 HCCSP53701 268 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 MEPCEQ7L2J0 689 aaKnown RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 CELF2-AS1Q8N7Q2 184 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 TCEANCQ8N8B7 351 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 OR52H1Q8NGJ2 320 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 SPRYD4Q8WW59 207 aaPredicted RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 SIGLEC11Q96RL6 698 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 RBM4BQ9BQ04 359 aaKnown RBP16.89■□□□□ 0.29
TMEM53-205ENST00000372244 GABARAPL3Q9BY60 117 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 SLC22A4Q9H015 551 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 ZNF665Q9H7R5 613 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 SP140LQ9H930 580 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 KLHDC2Q9Y2U9 406 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 NPTNQ9Y639 398 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 DYSFO75923 2080 aa16.89■□□□□ 0.29
TMEM53-205ENST00000372244 CUBNO60494 3623 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 SAC3D1A6NKF1 404 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 F5H5P2 479 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 XRCC2O43543 280 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 IGHV2-70P01814 119 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 H2BFMP0C1H6 154 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 HSD11B1P28845 292 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 GATA4P43694 442 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 DVL1P1P54792 670 aaPredicted RBP16.88■□□□□ 0.29
TMEM53-205ENST00000372244 ZNF121P58317 390 aaPredicted RBP16.88■□□□□ 0.29
TMEM53-205ENST00000372244 MAB21L1Q13394 359 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 FAM120AOSQ5T036 256 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 BCDIN3DQ7Z5W3 292 aaKnown RBP16.88■□□□□ 0.29
TMEM53-205ENST00000372244 PEG10Q86TG7 708 aaKnown RBP16.88■□□□□ 0.29
TMEM53-205ENST00000372244 TMEM163Q8TC26 289 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 BEX2Q9BXY8 128 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 OPA3Q9H6K4 179 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 ZNF319Q9P2F9 582 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 LPAR3Q9UBY5 353 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 N6AMT1Q9Y5N5 214 aa16.88■□□□□ 0.29
TMEM53-205ENST00000372244 TMEM178BH3BS89 294 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 IFNL4K9M1U5 179 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 M0R129 80 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 IGHV2-5P01817 119 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 ALPLP05186 524 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 NXNL2Q5VZ03 156 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 LRRC28Q86X40 367 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-205ENST00000372244 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.87■□□□□ 0.29
TMEM53-205ENST00000372244 SHARPINQ9H0F6 387 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 HAO2Q9NYQ3 351 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 MRPL15Q9P015 296 aaKnown RBP16.87■□□□□ 0.29
TMEM53-205ENST00000372244 LAMP5Q9UJQ1 280 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 MXRA5Q9NR99 2828 aa16.87■□□□□ 0.29
TMEM53-205ENST00000372244 GGT3PA6NGU5 568 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 GMDSO60547 372 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 ANXA2P07355 339 aaKnown RBP16.86■□□□□ 0.29
TMEM53-205ENST00000372244 ANPEPP15144 967 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 CA6P23280 308 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 DDOSTP39656 456 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 PMELP40967 661 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 CD200P41217 278 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 FAM3AP98173 230 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 ZNF181Q2M3W8 571 aa16.86■□□□□ 0.29
TMEM53-205ENST00000372244 LCN1P1Q5VSP4 162 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms