RNA–Protein interactions for RNA: ENST00000298281.8

PCF11-201, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PCF11, Length 7,677 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-201ENST00000298281 RASD2Q96D21 266 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CXorf58Q96LI9 332 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 UBTD1Q9HAC8 227 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 FGF21Q9NSA1 209 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 MARCH5Q9NX47 278 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 FBXL4Q9UKA2 621 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 S100A8P05109 93 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 TBC1D26Q86UD7 250 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 TMEM123Q8N131 208 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 OR4F17Q8NGA8 305 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 ARRDC2Q8TBH0 407 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 LRRC15Q8TF66 581 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 GPX7Q96SL4 187 aaPredicted RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 ZNF416Q9BWM5 594 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 METTL17Q9H7H0 456 aaPredicted RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 ZNF195O14628 629 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 VAMP5O95183 116 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 PTBP1P26599 531 aaKnown RBP eCLIP11.01□□□□□ -0.657e-6■□□□□ 8.1
PCF11-201ENST00000298281 GPM6AP51674 278 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CNN1P51911 297 aaKnown RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 TPBGQ13641 420 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 LCN15Q6UWW0 184 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CARFQ8N187 725 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 OR1N2Q8NGR9 330 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 LINC00052Q96N35 136 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 TMEM38AQ9H6F2 299 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 MPDZO75970 2070 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 ZNF727A8MUV8 499 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 SYNGR2O43760 224 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 EIF4E2O60573 245 aaKnown RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 WDR1O75083 606 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 PMS2P2O95744 297 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 GDNFP39905 211 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 CSNK1EP49674 416 aaKnown RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 ADGRE4PQ86SQ3 457 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 SLC38A6Q8IZM9 456 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 OR1L3Q8NH93 324 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 SPAG8Q99932 426 aaPredicted RBP11.01□□□□□ -0.65
PCF11-201ENST00000298281 MS4A8Q9BY19 250 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 DLL4Q9NR61 685 aa11.01□□□□□ -0.65
PCF11-201ENST00000298281 LOC100289279A0A1B0GTE1 492 aa11□□□□□ -0.65
PCF11-201ENST00000298281 SLC19A1P41440 591 aa11□□□□□ -0.65
PCF11-201ENST00000298281 LGALS7P47929 136 aa11□□□□□ -0.65
PCF11-201ENST00000298281 PPOXP50336 477 aa11□□□□□ -0.65
PCF11-201ENST00000298281 ALKBH1Q13686 389 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 PRSS21Q9Y6M0 314 aa11□□□□□ -0.65
PCF11-201ENST00000298281 A0A096LPE4 126 aa11□□□□□ -0.65
PCF11-201ENST00000298281 A0A1W2PPZ6 126 aa11□□□□□ -0.65
PCF11-201ENST00000298281 TTRP02766 147 aa11□□□□□ -0.65
PCF11-201ENST00000298281 ID4P47928 161 aa11□□□□□ -0.65
PCF11-201ENST00000298281 PMP22Q01453 160 aa11□□□□□ -0.65
PCF11-201ENST00000298281 COL5A1-AS1Q5SY13 56 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OR2T8A6NH00 312 aa11□□□□□ -0.65
PCF11-201ENST00000298281 DUS4LO95620 317 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 OPN1MWP04001 364 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OPN1MW2P0DN77 364 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OPN1MW3P0DN78 364 aa11□□□□□ -0.65
PCF11-201ENST00000298281 FPR3P25089 353 aa11□□□□□ -0.65
PCF11-201ENST00000298281 BCL6P41182 706 aa11□□□□□ -0.65
PCF11-201ENST00000298281 NKX2-1P43699 371 aaPredicted RBP11□□□□□ -0.65
PCF11-201ENST00000298281 RACK1P63244 317 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 C6orf15Q6UXA7 325 aaPredicted RBP11□□□□□ -0.65
PCF11-201ENST00000298281 MAML2Q8IZL2 1156 aaPredicted RBP11□□□□□ -0.65
PCF11-201ENST00000298281 LYRM4Q9HD34 91 aa11□□□□□ -0.65
PCF11-201ENST00000298281 PARD6AQ9NPB6 346 aa11□□□□□ -0.65
PCF11-201ENST00000298281 TRBV4-1A0A0J9YWV2 114 aa11□□□□□ -0.65
PCF11-201ENST00000298281 SBK2P0C263 348 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OR52N1Q8NH53 320 aa11□□□□□ -0.65
PCF11-201ENST00000298281 RAB37Q96AX2 223 aa11□□□□□ -0.65
PCF11-201ENST00000298281 ICAM5Q9UMF0 924 aa11□□□□□ -0.65
PCF11-201ENST00000298281 DIMT1Q9UNQ2 313 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 RFPL4AA6NLU0 287 aa11□□□□□ -0.65
PCF11-201ENST00000298281 RFPL4AL1F8VTS6 287 aa11□□□□□ -0.65
PCF11-201ENST00000298281 RHBDL1O75783 438 aa11□□□□□ -0.65
PCF11-201ENST00000298281 SLC25A5P05141 298 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 PRSS1P07477 247 aa11□□□□□ -0.65
PCF11-201ENST00000298281 PSMB5P28074 263 aa11□□□□□ -0.65
PCF11-201ENST00000298281 CLDN12P56749 244 aa11□□□□□ -0.65
PCF11-201ENST00000298281 IAH1Q2TAA2 248 aaPredicted RBP11□□□□□ -0.65
PCF11-201ENST00000298281 SLCO4C1Q6ZQN7 724 aa11□□□□□ -0.65
PCF11-201ENST00000298281 MED25Q71SY5 747 aa11□□□□□ -0.65
PCF11-201ENST00000298281 TIPARPQ7Z3E1 657 aaKnown RBP11□□□□□ -0.65
PCF11-201ENST00000298281 TMEM174Q8WUU8 243 aa11□□□□□ -0.65
PCF11-201ENST00000298281 CRYGNQ8WXF5 182 aa11□□□□□ -0.65
PCF11-201ENST00000298281 TAAR6Q96RI8 345 aa11□□□□□ -0.65
PCF11-201ENST00000298281 BANF2Q9H503 90 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OSGIN1Q9UJX0 560 aa11□□□□□ -0.65
PCF11-201ENST00000298281 SLC17A4Q9Y2C5 497 aa11□□□□□ -0.65
PCF11-201ENST00000298281 GASTP01350 101 aa11□□□□□ -0.65
PCF11-201ENST00000298281 VEGFBP49765 207 aa11□□□□□ -0.65
PCF11-201ENST00000298281 FAM78AQ5JUQ0 283 aa11□□□□□ -0.65
PCF11-201ENST00000298281 LSMEM1Q8N8F7 131 aa11□□□□□ -0.65
PCF11-201ENST00000298281 OR10Z1Q8NGY1 313 aa11□□□□□ -0.65
PCF11-201ENST00000298281 TSLPQ969D9 159 aa11□□□□□ -0.65
PCF11-201ENST00000298281 SLC39A13Q96H72 371 aa11□□□□□ -0.65
PCF11-201ENST00000298281 M0R135 149 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 ARR3P36575 388 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 RFX2P48378 723 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 C19orf57Q0VDD7 668 aa10.99□□□□□ -0.65
PCF11-201ENST00000298281 CST9Q5W186 159 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms