RNA–Protein interactions for RNA: ENST00000291842.9

SHKBP1-201, Transcript of SH3KBP1 binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHKBP1, Length 2,363 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-201ENST00000291842 ADH6P28332 368 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 OR3A4PP47883 348 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 CXADRP78310 365 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 SORDQ00796 357 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 LPAL2Q16609 132 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF468Q5VIY5 522 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 OPN5Q6U736 354 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 COMMD7Q86VX2 200 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 WDR5BQ86VZ2 330 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 TMEM156Q8N614 296 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 BANF2Q9H503 90 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 ZDBF2Q9HCK1 2354 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 A0A1W2PP11 408 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 C9J4A7 227 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 RAB12Q6IQ22 244 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF529Q6P280 563 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 GLIPR1L1Q6UWM5 242 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 C3P1Q6ZMU1 363 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 GTPBP8Q8N3Z3 284 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 SLC39A7Q92504 469 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 SLC25A21Q9BQT8 299 aaPredicted RBP16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 UQCC2Q9BRT2 126 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 ZNF700Q9H0M5 742 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 GLTPQ9NZD2 209 aa16.21■□□□□ 0.19
SHKBP1-201ENST00000291842 PMS2P2O95744 297 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 SSR4P51571 173 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 AP2S1P53680 142 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 TRIM61Q5EBN2 209 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 RNASE10Q5GAN6 216 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 CLLU1Q5K131 121 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 OR5AS1Q8N127 324 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 C12orf45Q8N5I9 185 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 NPRL2Q8WTW4 380 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 CCDC107Q8WV48 283 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 TMPRSS13Q9BYE2 586 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 VSIG4Q9Y279 399 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 CELSR3Q9NYQ7 3312 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 F5H5K5 113 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 NTN3O00634 580 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 ZIC3O60481 467 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 HCKP08631 526 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 TDGF1P13385 188 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 HOXA6P31267 233 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 HRH1P35367 487 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 RAB14P61106 215 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 DHRS2Q13268 280 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 HLXQ14774 488 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 HDDC2Q7Z4H3 204 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 LIN37Q96GY3 246 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 ARL6Q9H0F7 186 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 ALX4Q9H161 411 aaPredicted RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 DKKL1Q9UK85 242 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 MRPS28Q9Y2Q9 187 aaKnown RBP16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 KCNK7Q9Y2U2 307 aa16.2■□□□□ 0.18
SHKBP1-201ENST00000291842 A0A0A6YYD4 124 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 OR14I1A6ND48 311 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 I3L521 148 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 TLX3O43711 291 aaPredicted RBP16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 MPIG6BO95866 241 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 LIFP15018 202 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 CSNK1A1P48729 337 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 RPS18P62269 152 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 H3F3AP84243 136 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 EXT1Q16394 746 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 LIN54Q6MZP7 749 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 TMUB2Q71RG4 321 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 RPS19BP1Q86WX3 136 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 STEAP2Q8NFT2 490 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 OR5D18Q8NGL1 313 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 MRGPRFQ96AM1 343 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 ANGPTL4Q9BY76 406 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 GSX2Q9BZM3 304 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 IFT46Q9NQC8 304 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 NSG1A0A0A6YYJ2 146 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 OR5H15A6NDH6 313 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 DISC1C4P0D8 188 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 H3BUI4 141 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 TNFSF11O14788 317 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 LAMTOR5O43504 91 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 MELTFP08582 738 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 S100A11P31949 105 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 SLC6A9P48067 706 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 ZFP36L1Q07352 338 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 LY6G6FQ5SQ64 297 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 ALKAL2Q6UX46 152 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 CDH26Q8IXH8 852 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 OR10R2Q8NGX6 335 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 RBM24Q9BX46 236 aaKnown RBP16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 MOB1AQ9H8S9 216 aa16.19■□□□□ 0.18
SHKBP1-201ENST00000291842 POM121CA8CG34 1229 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 TMEM14DPA8MWL7 114 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 CCSO14618 274 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 SOCS1O15524 211 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 SSX5O60225 188 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 HLA-AP01891 365 aaKnown RBP16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 ZNF250P15622 560 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 PPP3CBP16298 524 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 C4BPBP20851 252 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 CD96P40200 585 aa16.18■□□□□ 0.18
SHKBP1-201ENST00000291842 OR2Y1Q8NGV0 311 aa16.18■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.6 ms