RNA–Protein interactions for RNA: ENST00000254193.10

SNRPA1-201, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPA1, Length 1,055 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-201ENST00000254193 OR2V2Q96R30 315 aa15.21■□□□□ 0.03
SNRPA1-201ENST00000254193 SLC30A2Q9BRI3 323 aa15.21■□□□□ 0.03
SNRPA1-201ENST00000254193 TOR3AQ9H497 397 aa15.21■□□□□ 0.03
SNRPA1-201ENST00000254193 DCAF16Q9NXF7 216 aa15.21■□□□□ 0.03
SNRPA1-201ENST00000254193 ABCA1O95477 2261 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 IGHV3-64DA0A0J9YX35 117 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 CD300LBA8K4G0 201 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 CLDN25C9JDP6 229 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 EI24O14681 340 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 TBX1O43435 398 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 HLA-DPB1P04440 258 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 ALPLP05186 524 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 ALOX5APP20292 161 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 ZNF121P58317 390 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 LCN1P1Q5VSP4 162 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 LRRN1Q6UXK5 716 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 FAM57BQ71RH2 274 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 RHOUQ7L0Q8 258 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 MEPCEQ7L2J0 689 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 CBR4Q8N4T8 237 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 HPS1Q92902 700 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 REPIN1Q9BWE0 567 aaKnown RBP15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 YIPF3Q9GZM5 350 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 BRD7Q9NPI1 651 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 TMEM100Q9NV29 134 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 H2AFY2Q9P0M6 372 aaPredicted RBP15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 IL19Q9UHD0 177 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 LAMP5Q9UJQ1 280 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 WIPI2Q9Y4P8 454 aa15.2■□□□□ 0.02
SNRPA1-201ENST00000254193 CR1P17927 2039 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 GGT3PA6NGU5 568 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 MLNRO43193 412 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 TGFAP01135 160 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 TNFRSF1AP19438 455 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 NXNL2Q5VZ03 156 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 PRSS45Q7RTY3 260 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 HIST2H2ABQ8IUE6 130 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 SGK3Q96BR1 496 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 USE1Q9NZ43 259 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 ZNF319Q9P2F9 582 aa15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 NSD1Q96L73 2696 aaPredicted RBP15.19■□□□□ 0.02
SNRPA1-201ENST00000254193 F5H5P2 479 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 PSMD9O00233 223 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 CRLF1O75462 422 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 APOC1P02654 83 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 ALDH3A2P51648 485 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 ZIK1Q3SY52 487 aaPredicted RBP15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 FAM166AQ6J272 317 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 PQLC1Q8N2U9 271 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 RAB1CQ92928 201 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 TIMD4Q96H15 378 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 MEGF10Q96KG7 1140 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 CNN2Q99439 309 aaKnown RBP15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 SP140LQ9H930 580 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 TMEM106BQ9NUM4 274 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 COPS3Q9UNS2 423 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 PPP1R3CQ9UQK1 317 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 ORC6Q9Y5N6 252 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 ZFHX3Q15911 3703 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 NAV3Q8IVL0 2385 aa15.18■□□□□ 0.02
SNRPA1-201ENST00000254193 SONP18583 2426 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 A0A1B0GWJ7 208 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 SLC22A31A6NKX4 558 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 PRR32B1ATL7 298 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 XRCC2O43543 280 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 LMX1BO60663 402 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 CA6P23280 308 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 SRP9P49458 86 aaKnown RBP15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 LMO4P61968 165 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 SLC3A1Q07837 685 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 GFOD2Q3B7J2 385 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 ZNF771Q7L3S4 317 aaPredicted RBP15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 LINC01356Q8N9X3 169 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 OR56B2PQ8NGI1 322 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 UBE2FQ969M7 185 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 SPSB4Q96A44 273 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 REEP6Q96HR9 211 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 PGAM5Q96HS1 289 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 TTTY10Q9BZA0 68 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 OR10A2Q9H208 303 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 ADGRL4Q9HBW9 690 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 GCM1Q9NP62 436 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 LRP12Q9Y561 859 aa15.17■□□□□ 0.02
SNRPA1-201ENST00000254193 FAM157AC9JC47 383 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 BAG2O95816 211 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 RAD23AP54725 363 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 CDH15P55291 814 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 TIGD6Q17RP2 521 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 KRT77Q7Z794 578 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 GID4Q8IVV7 300 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 RFLNBQ8N5W9 214 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 OR52H1Q8NGJ2 320 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 OR8J1Q8NGP2 316 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 FAM81AQ8TBF8 368 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 C1orf159Q96HA4 380 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 SLC29A1Q99808 456 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 LPAR2Q9HBW0 351 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 KCNS2Q9ULS6 477 aa15.16■□□□□ 0.02
SNRPA1-201ENST00000254193 NIPBLQ6KC79 2804 aaeCLIP15.15■□□□□ 0.02
SNRPA1-201ENST00000254193 ISPDA4D126 451 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms