RNA–Protein interactions for RNA: ENST00000224237.9

VIM-201, Transcript of vimentin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIM, Length 1,868 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIM-201ENST00000224237 IL7P13232 177 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 ZNF20P17024 532 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 ANOS1P23352 680 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 GNALP38405 381 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 FOXG1P55316 489 aaPredicted RBP15.85■□□□□ 0.13
VIM-201ENST00000224237 CLDN12P56749 244 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 MADCAM1Q13477 382 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 GUSBP1Q15486 140 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 GFOD2Q3B7J2 385 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 ACSF3Q4G176 576 aaPredicted RBP15.85■□□□□ 0.13
VIM-201ENST00000224237 OR2A2Q6IF42 318 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 MED12LQ86YW9 2145 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 PLPP7Q8NBV4 271 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 ADAT3Q96EY9 351 aaPredicted RBP15.85■□□□□ 0.13
VIM-201ENST00000224237 FAM71F1Q96KD3 344 aaPredicted RBP15.85■□□□□ 0.13
VIM-201ENST00000224237 NEURL2Q9BR09 285 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 OR10A2Q9H208 303 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 RNF121Q9H920 327 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 PLEKHA1Q9HB21 404 aa15.85■□□□□ 0.13
VIM-201ENST00000224237 MAP1BP46821 2468 aaKnown RBP15.85■□□□□ 0.13
VIM-201ENST00000224237 A0A096LPE4 126 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 A0A1W2PPZ6 126 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 E9PLN8 166 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 SLC17A2O00624 439 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 ITGA5P08648 1049 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 DDOSTP39656 456 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 PITPNBP48739 271 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 SF3B4Q15427 424 aaKnown RBP eCLIP15.84■□□□□ 0.139e-6■■□□□ 14.4
VIM-201ENST00000224237 PABPC1L2AQ5JQF8 200 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 SFRP5Q5T4F7 317 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 GCNT2Q8N0V5 402 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 Q8N402 240 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 CCDC54Q8NEL0 328 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 OR51A2Q8NGJ7 313 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 ZNF71Q9NQZ8 489 aaPredicted RBP15.84■□□□□ 0.13
VIM-201ENST00000224237 OR5V1Q9UGF6 321 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 CSF3P09919 207 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 CD37P11049 281 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 SPOCK1Q08629 439 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 FAM180AQ6UWF9 173 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 FOXRED1Q96CU9 486 aaPredicted RBP15.84■□□□□ 0.13
VIM-201ENST00000224237 ZZEF1O43149 2961 aa15.84■□□□□ 0.13
VIM-201ENST00000224237 A0A0G2JMP0 313 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 A0A0X1KG70 313 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 C1QTNF9BB2RNN3 333 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 DHRS3O75911 302 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 IL18BPO95998 194 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 C1QTNF9P0C862 333 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 RAB3AP20336 220 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 BDKRB2P30411 391 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 NR4A2P43354 598 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 CXADRP78310 365 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 RAB11BQ15907 218 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 NSUN5P2Q63ZY6 315 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 FAM166AQ6J272 317 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 PYHIN1Q6K0P9 492 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 ZNF529Q6P280 563 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 ZNF585AQ6P3V2 769 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 ANKRD16Q6P6B7 361 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 BAIAP2L2Q6UXY1 529 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 TFAP2EQ6VUC0 442 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 PGAP1Q75T13 922 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 DPPA2Q7Z7J5 298 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 OR4M2Q8NGB6 313 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 OR14K1Q8NGZ2 314 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 SETD6Q8TBK2 473 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 SOX7Q9BT81 388 aa15.83■□□□□ 0.12
VIM-201ENST00000224237 LOC390937A0A1W2PQ73 354 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 MTRF1O75570 445 aaKnown RBP15.82■□□□□ 0.12
VIM-201ENST00000224237 ARR3P36575 388 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 SCN1BQ07699 218 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 SNAI3Q3KNW1 292 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 KRTCAP3Q53RY4 240 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 Q6ZSR3 168 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 C9orf106Q8NAJ2 232 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 OR1M1Q8NGA1 313 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 OR6M1Q8NGM8 313 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 OR1K1Q8NGR3 316 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 RAB40AQ8WXH6 277 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 LYZL4Q96KX0 146 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 ABCG5Q9H222 651 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 TMEM138Q9NPI0 162 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 RABL2AQ9UBK7 228 aaPredicted RBP15.82■□□□□ 0.12
VIM-201ENST00000224237 RABL2BQ9UNT1 228 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 CACNA1AO00555 2505 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 C5orf63A6NC05 138 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 A6NIN4 97 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 UBL3O95164 117 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 CNOT4O95628 575 aaKnown RBP15.82■□□□□ 0.12
VIM-201ENST00000224237 HLA-HP01893 362 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 ERCC1P07992 297 aaPredicted RBP15.82■□□□□ 0.12
VIM-201ENST00000224237 FAM87AP0C7U9 286 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 COX5BP10606 129 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 GABRA1P14867 456 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 ABOP16442 354 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 HTR2CP28335 458 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 HGFACQ04756 655 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 TRIQKQ629K1 86 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 CMTM4Q8IZR5 234 aa15.82■□□□□ 0.12
VIM-201ENST00000224237 CADM3Q8N126 398 aa15.82■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 212.8 ms