RNA–Protein interactions for RNA: ENSMUST00000108530.1

Nup88-202, Transcript of Nuclear pore complex protein Nup88, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Nup88, Length 2,389 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-202ENSMUST00000108530 Trav15d-2-dv6d-2A0A0G2JGQ7 117 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr727A2RTN7 324 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Raet1aO08602 253 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Raet1bO08603 253 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Bet1O35623 118 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Stc2O88452 296 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Igk-V19-17P01633 149 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Capza2P47754 286 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rap1aP62835 184 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Eif4eP63073 217 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Csrp2P97314 193 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adra2aQ01338 450 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Fam160a2Q3U2I3 975 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Sez6Q7TSK2 991 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Plppr1Q8BFZ2 325 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 SynbQ8BI41 618 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Fam120cQ8C3F2 1091 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr516Q8VFZ5 314 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rap1bQ99JI6 184 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Myl9Q9CQ19 172 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 MmachcQ9CZD0 279 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ccdc107Q9DCC3 242 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Sec61a2Q9JLR1 476 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Prok2Q9QXU7 128 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Eif3iQ9QZD9 325 aaKnown RBP13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 RelnQ60841 3461 aa13.18□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm29106A0A087WSP8 697 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Dcaf10A2AKB9 566 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp345A2AQA1 561 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp229E9PWT2 705 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pcdh17E9PXF0 1157 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 4930579F01RikE9Q3L6 325 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr370E9Q848 314 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr199F6ZUS0 308 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Alx3O70137 343 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Csn1s1P19228 313 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ccl9P51670 122 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gpr143P70259 405 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 FapP97321 761 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr5Q60889 312 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tas2r136Q7TQA8 305 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr787Q7TRI1 312 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr598Q7TRR2 319 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Pgm2Q7TSV4 620 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tmprss7Q8BIK6 829 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Wdfy2Q8BUB4 400 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Lrp12Q8BUJ9 858 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1346Q8VGH6 313 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Nop16Q9CPT5 178 aaKnown RBP13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Rpl22l1Q9D7S7 122 aaKnown RBP13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Vmn1r56Q9EPS9 310 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 I0C0044D17RikA6PWL3 169 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 CrygsO35486 178 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Guca2aP33680 116 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Hsd17b8P50171 259 aaKnown RBP13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gch1Q05915 241 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 EgflamQ4VBE4 1017 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 ArhgdigQ62160 225 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 CstbQ62426 98 aaKnown RBP13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1140Q7TR39 311 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zfp747Q8BHM7 422 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 FlcnQ8QZS3 579 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr1487Q8VFQ6 315 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Defb8Q91V82 60 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Letmd1Q924L1 360 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Adh4Q9QYY9 377 aa13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Mecp2Q9Z2D6 484 aaKnown RBP13.17□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm3285A0A1W2P7U0 201 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cdh19E9Q3A7 770 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr420E9Q4G0 321 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tpi1P17751 299 aaKnown RBP13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Sftpa1P35242 248 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 St6gal1Q64685 403 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tas2r143Q7TQB9 293 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 SargQ8BI29 606 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Zdhhc1Q8R0N9 484 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Znf385aQ8VD12 386 aaKnown RBP13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr47Q8VF18 321 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr272Q8VGA0 319 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Oasl1Q8VI94 511 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Cox4i2Q91W29 172 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Nkx6-1Q99MA9 365 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Mrto4Q9D0I8 239 aaKnown RBP13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Trp53tg5Q9D976 238 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tmem225Q9D9S2 230 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr934Q9EQ87 310 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Col6a6Q8C6K9 2265 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 CymB7ZWD6 379 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Trav13d-3J3QMG8 112 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm6401L7N2C0 213 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Ogg1O08760 345 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Tlx3O55144 291 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Dpm1O70152 260 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Itln1O88310 313 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Brd7O88665 651 aaKnown RBP13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Gm10881P01642 115 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Crtc2Q3U182 692 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr429Q7TRW1 312 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 Olfr304Q7TS03 333 aa13.16□□□□□ -0.3
Nup88-202ENSMUST00000108530 NraddQ8CJ26 228 aa13.16□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 57.2 ms