Protein–RNA interactions for Protein: E9Q3A7

Cdh19, Cadherin 19, type 2, mousemouse

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh19E9Q3A7 Gm25239-201ENSMUST00000174915 86 ntBASIC37.54■■■■□ 3.6
Cdh19E9Q3A7 Smc2os-201ENSMUST00000141473 626 ntTSL 1 (best) BASIC34.87■■■■□ 3.17
Cdh19E9Q3A7 1810037I17Rik-201ENSMUST00000106429 1160 ntAPPRIS P1 TSL 1 (best) BASIC34.42■■■■□ 3.1
Cdh19E9Q3A7 Gm24109-201ENSMUST00000175489 103 ntBASIC32.72■■■□□ 2.83
Cdh19E9Q3A7 Gm15042-201ENSMUST00000120212 883 ntBASIC32.54■■■□□ 2.8
Cdh19E9Q3A7 Kdm2a-208ENSMUST00000176483 1128 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
Cdh19E9Q3A7 Kcnmb4-201ENSMUST00000068233 1367 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
Cdh19E9Q3A7 Gatad1-202ENSMUST00000119783 1278 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
Cdh19E9Q3A7 Gm15045-201ENSMUST00000117359 883 ntBASIC31.67■■■□□ 2.66
Cdh19E9Q3A7 Gm23366-201ENSMUST00000175022 89 ntBASIC31.39■■■□□ 2.62
Cdh19E9Q3A7 Arhgdig-201ENSMUST00000025019 1032 ntAPPRIS P1 TSL 1 (best) BASIC31.2■■■□□ 2.59
Cdh19E9Q3A7 AC153911.1-202ENSMUST00000218534 1034 ntBASIC30.6■■■□□ 2.49
Cdh19E9Q3A7 Necab2-201ENSMUST00000098363 1976 ntAPPRIS P1 TSL 1 (best) BASIC30.43■■■□□ 2.46
Cdh19E9Q3A7 Fgf2-204ENSMUST00000138563 1240 ntAPPRIS P2 TSL 5 BASIC30.38■■■□□ 2.45
Cdh19E9Q3A7 Cd63-201ENSMUST00000026407 1063 ntAPPRIS P1 TSL 1 (best) BASIC30.36■■■□□ 2.45
Cdh19E9Q3A7 Gm20732-201ENSMUST00000175699 686 ntTSL 3 BASIC30.28■■■□□ 2.44
Cdh19E9Q3A7 Fgf18-201ENSMUST00000020507 1086 ntAPPRIS P1 TSL 1 (best) BASIC30.25■■■□□ 2.43
Cdh19E9Q3A7 Tusc1-201ENSMUST00000066774 1374 ntAPPRIS P1 BASIC30.12■■■□□ 2.41
Cdh19E9Q3A7 Asmt-201ENSMUST00000178693 1191 ntAPPRIS P1 TSL 1 (best) BASIC30.1■■■□□ 2.41
Cdh19E9Q3A7 Khdrbs3-201ENSMUST00000022954 1887 ntAPPRIS P1 TSL 1 (best) BASIC29.95■■■□□ 2.39
Cdh19E9Q3A7 Drap1-203ENSMUST00000113674 939 ntTSL 2 BASIC29.85■■■□□ 2.37
Cdh19E9Q3A7 Pkig-201ENSMUST00000064703 1036 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
Cdh19E9Q3A7 Rexo2-201ENSMUST00000034524 1077 ntAPPRIS P1 TSL 1 (best) BASIC29.8■■■□□ 2.36
Cdh19E9Q3A7 Gm25238-201ENSMUST00000174914 89 ntBASIC29.69■■■□□ 2.34
Cdh19E9Q3A7 Ankrd40-202ENSMUST00000051221 1477 ntAPPRIS ALT2 TSL 1 (best) BASIC29.52■■■□□ 2.32
Cdh19E9Q3A7 Cacng8-202ENSMUST00000182222 1897 ntAPPRIS P1 TSL 5 BASIC29.48■■■□□ 2.31
Cdh19E9Q3A7 Rhno1-201ENSMUST00000057421 1584 ntAPPRIS P1 TSL 1 (best) BASIC29.27■■■□□ 2.28
Cdh19E9Q3A7 Syce2-204ENSMUST00000170296 929 ntAPPRIS ALT2 TSL 2 BASIC29.21■■■□□ 2.27
Cdh19E9Q3A7 B330016D10Rik-201ENSMUST00000049927 1701 ntBASIC29.18■■■□□ 2.26
Cdh19E9Q3A7 Ctdnep1-201ENSMUST00000108593 1627 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
Cdh19E9Q3A7 Crk-202ENSMUST00000093115 965 ntTSL 1 (best) BASIC29.09■■■□□ 2.25
Cdh19E9Q3A7 Plekho1-201ENSMUST00000015889 1931 ntAPPRIS P1 TSL 1 (best) BASIC29.04■■■□□ 2.24
Cdh19E9Q3A7 Ybx2-201ENSMUST00000018698 1673 ntAPPRIS P3 TSL 1 (best) BASIC28.97■■■□□ 2.23
Cdh19E9Q3A7 Tmem240-201ENSMUST00000127188 1308 ntAPPRIS P1 TSL 2 BASIC28.91■■■□□ 2.22
Cdh19E9Q3A7 Hoxd8-202ENSMUST00000074721 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC28.84■■■□□ 2.21
Cdh19E9Q3A7 Rnf149-204ENSMUST00000195705 389 ntTSL 3 BASIC28.83■■■□□ 2.21
Cdh19E9Q3A7 Crk-204ENSMUST00000108426 671 ntTSL 3 BASIC28.81■■■□□ 2.2
Cdh19E9Q3A7 Gm25262-201ENSMUST00000174934 133 ntBASIC28.72■■■□□ 2.19
Cdh19E9Q3A7 Drap1-201ENSMUST00000025853 992 ntAPPRIS P1 TSL 1 (best) BASIC28.72■■■□□ 2.19
Cdh19E9Q3A7 4930537H20Rik-201ENSMUST00000200437 1683 ntBASIC28.69■■■□□ 2.18
Cdh19E9Q3A7 Tprgl-202ENSMUST00000105639 642 ntTSL 5 BASIC28.55■■■□□ 2.16
Cdh19E9Q3A7 Trnp1-202ENSMUST00000125541 1654 ntAPPRIS P1 TSL 1 (best) BASIC28.42■■■□□ 2.14
Cdh19E9Q3A7 Gm27325-201ENSMUST00000175467 74 ntBASIC28.41■■■□□ 2.14
Cdh19E9Q3A7 B430219N15Rik-202ENSMUST00000180853 1105 ntBASIC28.31■■■□□ 2.12
Cdh19E9Q3A7 Ppp2cb-201ENSMUST00000009774 1469 ntAPPRIS P1 TSL 1 (best) BASIC28.25■■■□□ 2.11
Cdh19E9Q3A7 BC030336-205ENSMUST00000208454 813 ntTSL 2 BASIC28.24■■■□□ 2.11
Cdh19E9Q3A7 Pkdcc-204ENSMUST00000170794 2446 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
Cdh19E9Q3A7 Pabpn1-207ENSMUST00000150975 1775 ntAPPRIS ALT2 TSL 1 (best) BASIC28.17■■■□□ 2.1
Cdh19E9Q3A7 Rab21-202ENSMUST00000218831 843 ntBASIC28.17■■■□□ 2.1
Cdh19E9Q3A7 Hnrnpd-201ENSMUST00000019128 2000 ntAPPRIS ALT2 TSL 1 (best) BASIC28.15■■■□□ 2.1
Cdh19E9Q3A7 Gm26115-201ENSMUST00000175605 87 ntBASIC28.15■■■□□ 2.1
Cdh19E9Q3A7 Glrx5-203ENSMUST00000223244 793 ntTSL 5 BASIC28.14■■■□□ 2.1
Cdh19E9Q3A7 Psd-208ENSMUST00000224556 2034 ntBASIC28.09■■■□□ 2.09
Cdh19E9Q3A7 Rnf126-201ENSMUST00000047203 1639 ntAPPRIS P1 TSL 1 (best) BASIC28.07■■■□□ 2.08
Cdh19E9Q3A7 Mapk3-201ENSMUST00000050201 1267 ntAPPRIS ALT2 TSL 3 BASIC28.06■■■□□ 2.08
Cdh19E9Q3A7 Ppp2r5c-206ENSMUST00000222276 1802 ntTSL 2 BASIC28.04■■■□□ 2.08
Cdh19E9Q3A7 Kctd9-204ENSMUST00000150768 1302 ntAPPRIS P1 TSL 5 BASIC28.03■■■□□ 2.08
Cdh19E9Q3A7 Fam220a-203ENSMUST00000118121 919 ntTSL 1 (best) BASIC28■■■□□ 2.07
Cdh19E9Q3A7 Cacng8-201ENSMUST00000092351 1380 ntAPPRIS P1 TSL 1 (best) BASIC27.99■■■□□ 2.07
Cdh19E9Q3A7 Olfm1-203ENSMUST00000102879 1072 ntTSL 1 (best) BASIC27.94■■■□□ 2.06
Cdh19E9Q3A7 Bcl7c-201ENSMUST00000061468 1132 ntAPPRIS P1 TSL 1 (best) BASIC27.93■■■□□ 2.06
Cdh19E9Q3A7 Gm8109-201ENSMUST00000194076 746 ntBASIC27.89■■■□□ 2.06
Cdh19E9Q3A7 Gsx2-202ENSMUST00000160104 1182 ntTSL 1 (best) BASIC27.81■■■□□ 2.04
Cdh19E9Q3A7 Sh3glb2-214ENSMUST00000163668 1733 ntTSL 5 BASIC27.79■■■□□ 2.04
Cdh19E9Q3A7 Fam122a-201ENSMUST00000099556 855 ntAPPRIS P1 BASIC27.67■■■□□ 2.02
Cdh19E9Q3A7 Crebl2-202ENSMUST00000111937 612 ntTSL 3 BASIC27.65■■■□□ 2.02
Cdh19E9Q3A7 Svbp-202ENSMUST00000097908 832 ntTSL 2 BASIC27.6■■■□□ 2.01
Cdh19E9Q3A7 Pabpn1-202ENSMUST00000116476 1761 ntAPPRIS ALT2 TSL 1 (best) BASIC27.6■■■□□ 2.01
Cdh19E9Q3A7 Rrnad1-207ENSMUST00000160143 1568 ntTSL 5 BASIC27.58■■■□□ 2.01
Cdh19E9Q3A7 Zic2-201ENSMUST00000075888 2440 ntAPPRIS P1 TSL 1 (best) BASIC27.56■■■□□ 2
Cdh19E9Q3A7 Gpr137c-202ENSMUST00000147957 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC27.53■■■□□ 2
Cdh19E9Q3A7 Nrgn-201ENSMUST00000065668 1453 ntAPPRIS P1 TSL 1 (best) BASIC27.5■■□□□ 1.99
Cdh19E9Q3A7 B3gat3-201ENSMUST00000096243 1601 ntAPPRIS P1 TSL 1 (best) BASIC27.49■■□□□ 1.99
Cdh19E9Q3A7 Tmed7-201ENSMUST00000036030 1436 ntTSL 5 BASIC27.43■■□□□ 1.98
Cdh19E9Q3A7 Tmem165-201ENSMUST00000031144 1897 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
Cdh19E9Q3A7 Mbd2-202ENSMUST00000114946 1290 ntTSL 1 (best) BASIC27.37■■□□□ 1.97
Cdh19E9Q3A7 Vps37d-201ENSMUST00000067935 1544 ntAPPRIS P1 TSL 1 (best) BASIC27.35■■□□□ 1.97
Cdh19E9Q3A7 Pabpn1-201ENSMUST00000022808 1030 ntAPPRIS P2 TSL 1 (best) BASIC27.33■■□□□ 1.97
Cdh19E9Q3A7 Ino80b-202ENSMUST00000113935 1503 ntAPPRIS ALT2 TSL 1 (best) BASIC27.3■■□□□ 1.96
Cdh19E9Q3A7 Sh3glb2-204ENSMUST00000113621 1851 ntTSL 5 BASIC27.28■■□□□ 1.96
Cdh19E9Q3A7 Enho-201ENSMUST00000127306 1269 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
Cdh19E9Q3A7 Gdf7-201ENSMUST00000037313 1423 ntAPPRIS P2 TSL 5 BASIC27.24■■□□□ 1.95
Cdh19E9Q3A7 Mbd2-201ENSMUST00000074058 1953 ntAPPRIS P1 TSL 1 (best) BASIC27.23■■□□□ 1.95
Cdh19E9Q3A7 Gm17082-201ENSMUST00000166043 1091 ntBASIC27.19■■□□□ 1.94
Cdh19E9Q3A7 Gm12339-201ENSMUST00000127424 728 ntTSL 3 BASIC27.14■■□□□ 1.94
Cdh19E9Q3A7 Maz-202ENSMUST00000205461 796 ntTSL 5 BASIC27.14■■□□□ 1.94
Cdh19E9Q3A7 Tmed7-203ENSMUST00000151189 1348 ntAPPRIS P1 TSL 1 (best) BASIC27.12■■□□□ 1.93
Cdh19E9Q3A7 Agap3-206ENSMUST00000212381 1191 ntTSL 5 BASIC27.06■■□□□ 1.92
Cdh19E9Q3A7 Cyhr1-203ENSMUST00000176274 1854 ntAPPRIS ALT2 TSL 1 (best) BASIC27.02■■□□□ 1.92
Cdh19E9Q3A7 Clec2l-201ENSMUST00000114874 1428 ntAPPRIS P1 TSL 2 BASIC27.01■■□□□ 1.91
Cdh19E9Q3A7 Hnrnpd-203ENSMUST00000112939 1670 ntAPPRIS ALT2 TSL 5 BASIC27.01■■□□□ 1.91
Cdh19E9Q3A7 Gm27322-201ENSMUST00000184007 104 ntBASIC27■■□□□ 1.91
Cdh19E9Q3A7 Ubtd2-201ENSMUST00000051053 1012 ntAPPRIS P1 TSL 1 (best) BASIC27■■□□□ 1.91
Cdh19E9Q3A7 Atoh7-201ENSMUST00000044059 1629 ntAPPRIS P1 BASIC27■■□□□ 1.91
Cdh19E9Q3A7 Six2-202ENSMUST00000163568 2119 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.91
Cdh19E9Q3A7 Fcho2-204ENSMUST00000179563 1586 ntTSL 5 BASIC26.96■■□□□ 1.91
Cdh19E9Q3A7 Gm24804-201ENSMUST00000174982 85 ntBASIC26.94■■□□□ 1.9
Cdh19E9Q3A7 Mta3-202ENSMUST00000112349 1728 ntAPPRIS ALT2 TSL 1 (best) BASIC26.93■■□□□ 1.9
Cdh19E9Q3A7 Nkx1-1-201ENSMUST00000173348 1209 ntAPPRIS P1 TSL 5 BASIC26.9■■□□□ 1.9
Cdh19E9Q3A7 Bzw1-202ENSMUST00000186949 1492 ntTSL 5 BASIC26.84■■□□□ 1.89
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms