RNA–Protein interactions for RNA: ENST00000631020.2

PNKP-224, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5 BASIC

Gene PNKP, Length 1,545 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-224ENST00000631020 ANOS1P23352 680 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 DYNC1I2Q13409 638 aaKnown RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 ZNF684Q5T5D7 378 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 FOXB2Q5VYV0 432 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 DTX2Q86UW9 622 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 ACBD7Q8N6N7 88 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 TRMT61AQ96FX7 289 aaKnown RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 C4orf45Q96LM5 186 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 OR8B4Q96RC9 309 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 KCNJ15Q99712 375 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 KCNS3Q9BQ31 491 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 COPS4Q9BT78 406 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 FKBP14Q9NWM8 211 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 CISD1Q9NZ45 108 aaKnown RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 GRIP1Q9Y3R0 1128 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 PCDHGB1Q9Y5G3 927 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 NAV3Q8IVL0 2385 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 H7C1Q1 480 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 ICMTO60725 284 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 H2BFMP0C1H6 154 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 FAM157BP0CG42 384 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 HOXB4P17483 251 aaPredicted RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 PCSK6P29122 969 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 PRKXP51817 358 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 CSNK2BP67870 215 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 TAF13Q15543 124 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 CNPY1Q3B7I2 92 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 KCTD18Q6PI47 426 aaPredicted RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 CLEC9AQ6UXN8 241 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 KRT77Q7Z794 578 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 LHFPL3Q86UP9 236 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 SGCDQ92629 289 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 DGCR14Q96DF8 476 aaKnown RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 OR51B6Q9H340 312 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 ELOVL3Q9HB03 270 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 MRM2Q9UI43 246 aaKnown RBP16.04■□□□□ 0.16
PNKP-224ENST00000631020 LRP12Q9Y561 859 aa16.04■□□□□ 0.16
PNKP-224ENST00000631020 ZANQ9Y493 2812 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 DAPL1A0PJW8 107 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 E7EQL1 145 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 PHYHO14832 338 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 UCP2P55851 309 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 GRB2P62993 217 aaKnown RBP16.03■□□□□ 0.16
PNKP-224ENST00000631020 ACTC1P68032 377 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 ACTA1P68133 377 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 EGR3Q06889 387 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 ST3GAL4Q11206 333 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 DEGS2Q6QHC5 323 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 COLCA1Q6ZS62 124 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 ZNF679Q8IYX0 411 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 SPTSSAQ969W0 71 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 SMR3AQ99954 134 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 PAK1IP1Q9NWT1 392 aaPredicted RBP16.03■□□□□ 0.16
PNKP-224ENST00000631020 ERVK13-1Q9NX77 482 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 CNOT2Q9NZN8 540 aaKnown RBP16.03■□□□□ 0.16
PNKP-224ENST00000631020 ATP23Q9Y6H3 246 aa16.03■□□□□ 0.16
PNKP-224ENST00000631020 C5orf63A6NC05 138 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 EFCAB10A6NFE3 127 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 PTGES3LE9PB15 166 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 M0R135 149 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 PIPP12273 146 aaPredicted RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 CRHBPP24387 322 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 DCKP27707 260 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 TPTEP56180 551 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 ERVS71-1P61550 626 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 SNTB2Q13425 540 aaKnown RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 MSMPQ1L6U9 139 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 AHSA2Q719I0 299 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 HIST2H2ABQ8IUE6 130 aaPredicted RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 CIARTQ8N365 385 aaPredicted RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 ZNF786Q8N393 782 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 ZNF540Q8NDQ6 660 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 NUP37Q8NFH4 326 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 ZNF799Q96GE5 643 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 DCLRE1CQ96SD1 692 aaKnown RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 TRAF4Q9BUZ4 470 aaPredicted RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 JAM3Q9BX67 310 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 MROQ9BYG7 248 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 EIF3KQ9UBQ5 218 aaKnown RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 POU2F3Q9UKI9 436 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 IKZF2Q9UKS7 526 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 DIMT1Q9UNQ2 313 aaKnown RBP16.02■□□□□ 0.15
PNKP-224ENST00000631020 TLN2Q9Y4G6 2542 aa16.02■□□□□ 0.15
PNKP-224ENST00000631020 TRIM64A6NGJ6 449 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 TRIM64BA6NI03 449 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 GPRIN2O60269 458 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 ZNF254O75437 659 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 ABHD16AO95870 558 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 CCDC159P0C7I6 412 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 LIMS3P0CW19 117 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 LIMS4P0CW20 117 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 SLC2A1P11166 492 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 C21orf33P30042 268 aaPredicted RBP16.01■□□□□ 0.15
PNKP-224ENST00000631020 THBS4P35443 961 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 ETV1P50549 477 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 GALEQ14376 348 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 CDONQ4KMG0 1287 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 RFPL4BQ6ZWI9 263 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 PRSS45Q7RTY3 260 aa16.01■□□□□ 0.15
PNKP-224ENST00000631020 TSPAN14Q8NG11 270 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 56.7 ms