RNA–Protein interactions for RNA: ENST00000616545.4

TARDBP-217, Transcript of TAR DNA binding protein, humanhuman

TSL 5 BASIC

Gene TARDBP, Length 920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-217ENST00000616545 BCL2L14Q9BZR8 327 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 PBOV1Q9GZY1 135 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 G6PC2Q9NQR9 355 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 BATF3Q9NR55 127 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 NDUFB11Q9NX14 153 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 NDUFA13Q9P0J0 144 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 FRRS1LQ9P0K9 344 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 OR52A1Q9UKL2 312 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 CACNA1CQ13936 2221 aa10.11□□□□□ -0.79
TARDBP-217ENST00000616545 IGHV1-18A0A0C4DH31 117 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 LOC390937A0A1W2PQ73 354 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 A0A1W2PR80 420 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 OR4C45A6NMZ5 311 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 E9PI62 339 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 CASKO14936 926 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 PNPP00491 289 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 LALBAP00709 142 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 HLA-DPB1P04440 258 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 ANXA2P07355 339 aaKnown RBP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF35P13682 527 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 PLA2G2AP14555 144 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 GABRA5P31644 462 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 NAAAQ02083 359 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 MALLQ13021 153 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 TSTQ16762 297 aaKnown RBP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 YIF1BQ5BJH7 314 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 PAMR1Q6UXH9 720 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF676Q8N7Q3 588 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 SSC4DQ8WTU2 575 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 AKAP1Q92667 903 aaKnown RBP eCLIP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 GHSRQ92847 366 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 RNF166Q96A37 237 aaPredicted RBP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 PGAM5Q96HS1 289 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 BCL7BQ9BQE9 202 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 ESRP2Q9H6T0 727 aaKnown RBP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF281Q9Y2X9 895 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 GRIP1Q9Y3R0 1128 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 DIDO1Q9BTC0 2240 aaKnown RBP10.1□□□□□ -0.79
TARDBP-217ENST00000616545 NBEAQ8NFP9 2946 aa10.1□□□□□ -0.79
TARDBP-217ENST00000616545 DHRS7CA6NNS2 312 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 H3BSA7 217 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 M0R1B8 84 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 MTRF1O75570 445 aaKnown RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 GATBO75879 557 aaKnown RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 ZFPL1O95159 310 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 LCATP04180 440 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 THBDP07204 575 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 DBHP09172 617 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 ACHEP22303 614 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 CCL1P22362 96 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 CCNOP22674 350 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 CD40P25942 277 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 MAPK3P27361 379 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 LIPAP38571 399 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 PSMB10P40306 273 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 ZNF83P51522 516 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 GTF2A1P52655 376 aaPredicted RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 NANOS3P60323 173 aaKnown RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 RPS23P62266 143 aaKnown RBP10.09□□□□□ -0.79
TARDBP-217ENST00000616545 CDSNQ15517 529 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 BEX5Q5H9J7 111 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 WDR38Q5JTN6 314 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 LIPKQ5VXJ0 399 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 FAM57BQ71RH2 274 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 WFDC8Q8IUA0 241 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 PRSS35Q8N3Z0 413 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 OR8B12Q8NGG6 310 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 GPR148Q8TDV2 347 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 FAM222BQ8WU58 562 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 SLC7A6Q92536 515 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 SPSB4Q96A44 273 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 C10orf35Q96D05 121 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 YIPF6Q96EC8 236 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 MS4A3Q96HJ5 214 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 PGLYRP3Q96LB9 341 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 HHLA2Q9UM44 414 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 GTF2A1LQ9UNN4 478 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 SLC22A13Q9Y226 551 aa10.09□□□□□ -0.79
TARDBP-217ENST00000616545 IGHV2OR16-5A0A0B4J2B6 119 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 A0A1B0GVI7 797 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 SMIM31A0A1B0GVY4 71 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CLEC18AA5D8T8 446 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 VSTM5A8MXK1 200 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 IGLV3-1P01715 115 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 TTRP02766 147 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 RAF1P04049 648 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CELA3BP08861 270 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CD36P16671 472 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 KIR2DL3P43628 341 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 KIR3DL2P43630 455 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 UCP2P55851 309 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 SLC3A1Q07837 685 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 MFGE8Q08431 387 aaPredicted RBP10.08□□□□□ -0.8
TARDBP-217ENST00000616545 SSX1Q16384 188 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CD200R1LQ6Q8B3 271 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CLEC18BQ6UXF7 455 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 Q6ZSR3 168 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 DOK3Q7L591 496 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 ANKRD13BQ86YJ7 626 aa10.08□□□□□ -0.8
TARDBP-217ENST00000616545 CLEC18CQ8NCF0 446 aa10.08□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 53.7 ms