RNA–Protein interactions for RNA: ENST00000610828.4

NEK3-205, Transcript of NIMA related kinase 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NEK3, Length 2,396 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-205ENST00000610828 FAM71F1Q96KD3 344 aaPredicted RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 SLA2Q9H6Q3 261 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 GPR84Q9NQS5 396 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 ZNF319Q9P2F9 582 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 HSPB11Q9Y547 144 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 PCSK5Q92824 1860 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 A0A1B0GUH1 482 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 A0A1W2PNU3 283 aaPredicted RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 LDLRAD4O15165 306 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 ICMTO60725 284 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 NDUFB6O95139 128 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 TGM6O95932 706 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 SULT1A3P0DMM9 295 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 SULT1A4P0DMN0 295 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 ABOP16442 354 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 ANXA7P20073 488 aaKnown RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 RAD52P43351 418 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 LSM6P62312 80 aaKnown RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 GRB2P62993 217 aaKnown RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 PMPCAQ10713 525 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 MOGAT2Q3SYC2 334 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 C6orf183Q5T699 404 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 TMEM164Q5U3C3 297 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 METTL11BQ5VVY1 283 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 SLC22A24Q8N4F4 322 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 ACBD4Q8NC06 268 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 DEDD2Q8WXF8 326 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 DVL3Q92997 716 aaPredicted RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 LIN37Q96GY3 246 aaPredicted RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 THOC3Q96J01 351 aaKnown RBP12.03□□□□□ -0.48
NEK3-205ENST00000610828 SPRY4Q9C004 299 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 DEPPQ9NTK1 212 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 SLC5A6Q9Y289 635 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 RHBDD3Q9Y3P4 386 aa12.03□□□□□ -0.48
NEK3-205ENST00000610828 NCOA6Q14686 2063 aaPredicted RBP12.02□□□□□ -0.48
NEK3-205ENST00000610828 NCKAP5O14513 1909 aa12.02□□□□□ -0.48
NEK3-205ENST00000610828 LRRC3CA6NJW4 275 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 SMAD9O15198 467 aaKnown RBP12.02□□□□□ -0.49
NEK3-205ENST00000610828 AKR7A2O43488 359 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 CD3DP04234 171 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 AKAIN1P0CW23 69 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 DLSTP36957 453 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 RAC3P60763 192 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 RBMS2Q15434 407 aaKnown RBP12.02□□□□□ -0.49
NEK3-205ENST00000610828 Q6ZTK2 550 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 ZIC4Q8N9L1 334 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 GJC3Q8NFK1 279 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 GPX8Q8TED1 209 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 PSMF1Q92530 271 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 FAM46BQ96A09 425 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 SFXN2Q96NB2 322 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 SEC22CQ9BRL7 303 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 ULBP2Q9BZM5 246 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 METTL17Q9H7H0 456 aaPredicted RBP12.02□□□□□ -0.49
NEK3-205ENST00000610828 EMC3Q9P0I2 261 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 KIAA1549Q9HCM3 1950 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 DOCK10Q96BY6 2186 aa12.02□□□□□ -0.49
NEK3-205ENST00000610828 F5H5K5 113 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 DHHO43323 396 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 LPLP06858 475 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 GDF1P27539 372 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 CARD18P57730 90 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ACTBP60709 375 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ACTG1P63261 375 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 WIPI1Q5MNZ9 446 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 LAMTOR1Q6IAA8 161 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 KCNE4Q8WWG9 221 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 PNPLA2Q96AD5 504 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 SEH1LQ96EE3 360 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 SPACA5Q96QH8 159 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 GINS4Q9BRT9 223 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ZFP64Q9NPA5 681 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ELF5Q9UKW6 265 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 METTL21EPA6NDL7 271 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 PYCARD-AS1I3L0S3 204 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 S100A1P23297 94 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 AVPR2P30518 371 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ZNF93P35789 620 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 SLC6A9P48067 706 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 STARP49675 285 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 CAPZA1P52907 286 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ZP1P60852 638 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ENDOGQ14249 297 aaKnown RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 AWAT2Q6E213 333 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 SPINK14Q6IE38 97 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 GLDNQ6ZMI3 551 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 GGNQ86UU5 652 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 NAA40Q86UY6 237 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 CLEC1AQ8NC01 280 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 OR51S1Q8NGJ8 323 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 PTX4Q96A99 478 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 NABP1Q96AH0 204 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ZNF837Q96EG3 531 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 UQCC2Q9BRT2 126 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 RANBP3Q9H6Z4 567 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 RYDENQ9NUL5 291 aaKnown RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 LRFN1Q9P244 771 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 ZNF69Q9UC07 566 aa12.01□□□□□ -0.49
NEK3-205ENST00000610828 FOXD3Q9UJU5 478 aaPredicted RBP12.01□□□□□ -0.49
NEK3-205ENST00000610828 MGAT4AQ9UM21 535 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms