RNA–Protein interactions for RNA: ENST00000600517.1

ARHGEF1-222, Transcript of Rho guanine nucleotide exchange factor 1, human

TSL 3

Gene ARHGEF1, Length 428 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ARHGEF1-222	ENST00000600517	SLC15A1	P46059	708 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CDH15	P55291	814 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	LMO4	P61968	165 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	MVK	Q03426	396 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	MALL	Q13021	153 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	PTGES3	Q15185	160 aa	Known RBP	11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	KDM4D	Q6B0I6	523 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	FAM166A	Q6J272	317 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SHF	Q7M4L6	423 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	AMIGO2	Q86SJ2	522 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ERI1	Q8IV48	349 aa	Known RBP	11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	LINC01356	Q8N9X3	169 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	OR13G1	Q8NGZ3	307 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	LRTOMT	Q8WZ04	291 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CCL17	Q92583	94 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	RAB1C	Q92928	201 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	PLEKHA8	Q96JA3	519 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ZNF582	Q96NG8	517 aa	Predicted RBP	11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	KCNJ15	Q99712	375 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SLC30A2	Q9BRI3	323 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ABHD6	Q9BV23	337 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	GABARAPL1	Q9H0R8	117 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CENPM	Q9NSP4	180 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	IL19	Q9UHD0	177 aa		11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CHD3	Q12873	2000 aa	Known RBP	11.41	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	YLPM1	P49750	1951 aa	Known RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	IQCF6	A8MYZ5	107 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CLDN25	C9JDP6	229 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ZNF878	C9JN71	531 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	MITF	O75030	526 aa	Predicted RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	TNFRSF1A	P19438	455 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SLC2A5	P22732	501 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	PRKX	P51817	358 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ACTR3	P61158	418 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	EFNB1	P98172	346 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SLC3A1	Q07837	685 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	EIF2B1	Q14232	305 aa	Known RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	TAF13	Q15543	124 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SNAPC1	Q16533	368 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	SLC35D3	Q5M8T2	416 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	PGAP1	Q75T13	922 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CXXC5	Q7LFL8	322 aa	Known RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	PRIMA1	Q86XR5	153 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	OR5AS1	Q8N127	324 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	OR6N2	Q8NGY6	317 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	RNF133	Q8WVZ7	376 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	ZMYND19	Q96E35	227 aa	Predicted RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CENPN	Q96H22	339 aa	Predicted RBP	11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	COPS4	Q9BT78	406 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	KRT84	Q9NSB2	600 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	TVP23B	Q9NYZ1	205 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	TREM2	Q9NZC2	230 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	CDC42EP3	Q9UKI2	254 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	KCNS2	Q9ULS6	477 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517	WIPI2	Q9Y4P8	454 aa		11.4	□□□□□ -0.58
ARHGEF1-222	ENST00000600517		B4DSR2	109 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	EBAG9	O00559	213 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SLC6A9	P48067	706 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GRB2	P62993	217 aa	Known RBP	11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ATR	Q13535	2644 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SNAI3	Q3KNW1	292 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	CHRFAM7A	Q494W8	412 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	KLHL12	Q53G59	568 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	AVPI1	Q5T686	147 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SPATC1	Q76KD6	591 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF283	Q8N7M2	679 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF454	Q8N9F8	522 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	BBS1	Q8NFJ9	593 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OTOS	Q8NHW6	89 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TIMD4	Q96H15	378 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	AMELY	Q99218	206 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TEAD3	Q99594	435 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	REPIN1	Q9BWE0	567 aa	Known RBP	11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TOR3A	Q9H497	397 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	NARFL	Q9H6Q4	476 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEM100	Q9NV29	134 aa		11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	TMEFF2	Q9UIK5	374 aa	Predicted RBP	11.39	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	C5orf63	A6NC05	138 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZAR1L	A6NP61	321 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	FAM157A	C9JC47	383 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517		H0YL77	283 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MLNR	O43193	412 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SELENOF	O60613	162 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	APOC1	P02654	83 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ANOS1	P23352	680 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	IGFBP5	P24593	272 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	EPHA2	P29317	976 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OPRL1	P41146	370 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ZNF92	Q03936	586 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	GLYATL3	Q5SZD4	288 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	SLX4IP	Q5VYV7	408 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	MRPL21	Q7Z2W9	205 aa	Known RBP	11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PEG10	Q86TG7	708 aa	Known RBP	11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	BHLHE23	Q8NDY6	225 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	THEM6	Q8WUY1	208 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	ITLN1	Q8WWA0	313 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	PYDC1	Q8WXC3	89 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OR2V2	Q96R30	315 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	OSBPL10	Q9BXB5	764 aa		11.38	□□□□□ -0.59
ARHGEF1-222	ENST00000600517	BEX2	Q9BXY8	128 aa		11.38	□□□□□ -0.59

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