RNA–Protein interactions for RNA: ENST00000599398.5

CCDC9-204, Transcript of coiled-coil domain containing 9, humanhuman

TSL 3

Gene CCDC9, Length 834 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC9-204ENST00000599398 CUBNO60494 3623 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 TIPRLO75663 272 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 ATP5HO75947 161 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 MSMBP08118 114 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 OSMP13725 252 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 ANXA8P13928 327 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 SELEP16581 610 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 PAICSP22234 425 aaKnown RBP19.12■□□□□ 0.65
CCDC9-204ENST00000599398 PRSS12P56730 875 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 HNRNPA0Q13151 305 aaKnown RBP19.12■□□□□ 0.65
CCDC9-204ENST00000599398 ACSM5Q6NUN0 579 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 OR10AD1Q8NGE0 317 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 OR13G1Q8NGZ3 307 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 OR51F2Q8NH61 342 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 OR2V2Q96R30 315 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 GAL3ST1Q99999 423 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 DDX28Q9NUL7 540 aaKnown RBP19.12■□□□□ 0.65
CCDC9-204ENST00000599398 TMEM106BQ9NUM4 274 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 KIF17Q9P2E2 1029 aa19.12■□□□□ 0.65
CCDC9-204ENST00000599398 IQCF6A8MYZ5 107 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 DEAF1O75398 565 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-204ENST00000599398 PCMT1P22061 227 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 GK2Q14410 553 aaPredicted RBP19.11■□□□□ 0.65
CCDC9-204ENST00000599398 SPATC1Q76KD6 591 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 ERI1Q8IV48 349 aaKnown RBP19.11■□□□□ 0.65
CCDC9-204ENST00000599398 TMEM186Q96B77 213 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 SLAMF6Q96DU3 332 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 MDFIQ99750 246 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 OR51V1Q9H2C8 321 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 HIF1ANQ9NWT6 349 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 DCAF16Q9NXF7 216 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 UBAP1Q9NZ09 502 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 PPP1R3CQ9UQK1 317 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 WNK2Q9Y3S1 2297 aa19.11■□□□□ 0.65
CCDC9-204ENST00000599398 ANPEPP15144 967 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 RBMXP38159 391 aaKnown RBP19.1■□□□□ 0.65
CCDC9-204ENST00000599398 PRKXP51817 358 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 EIF2B1Q14232 305 aaKnown RBP19.1■□□□□ 0.65
CCDC9-204ENST00000599398 PCK2Q16822 640 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 TEX30Q5JUR7 227 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 LINC01590Q5TEZ4 76 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 SHQ1Q6PI26 577 aaKnown RBP19.1■□□□□ 0.65
CCDC9-204ENST00000599398 PGAP1Q75T13 922 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 MRPL21Q7Z2W9 205 aaKnown RBP19.1■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF283Q8N7M2 679 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 OR6N2Q8NGY6 317 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 INTS14Q96SY0 518 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 N6AMT1Q9Y5N5 214 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 NPTNQ9Y639 398 aa19.1■□□□□ 0.65
CCDC9-204ENST00000599398 ZNF878C9JN71 531 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 PRR23D1E9PI22 279 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-204ENST00000599398 H0YL77 283 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 GLCEO94923 617 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 IGHV2-5P01817 119 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 HMGN1P05114 100 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 SBK2P0C263 348 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 PRR23D2P0DMB1 279 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-204ENST00000599398 GSTT1P30711 240 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 SRP14P37108 136 aaKnown RBP19.09■□□□□ 0.65
CCDC9-204ENST00000599398 C1orf146Q5VVC0 180 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 PLBD1Q6P4A8 553 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 DRAM2Q6UX65 266 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 DPY19L4Q7Z388 723 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 SPRYD4Q8WW59 207 aaPredicted RBP19.09■□□□□ 0.65
CCDC9-204ENST00000599398 PLEKHA8Q96JA3 519 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 KCNJ15Q99712 375 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 SLC30A2Q9BRI3 323 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 TEX12Q9BXU0 123 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 NTN4Q9HB63 628 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 TMEM100Q9NV29 134 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 COL6A5A8TX70 2615 aa19.09■□□□□ 0.65
CCDC9-204ENST00000599398 SLC2A1P11166 492 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 SRP9P49458 86 aaKnown RBP19.08■□□□□ 0.64
CCDC9-204ENST00000599398 SNAI3Q3KNW1 292 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 KLHL12Q53G59 568 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 ST7LQ8TDW4 575 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 NRBF2Q96F24 287 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 MEGF10Q96KG7 1140 aa19.08■□□□□ 0.64
CCDC9-204ENST00000599398 MMADHCQ9H3L0 296 aaPredicted RBP19.08■□□□□ 0.64
CCDC9-204ENST00000599398 FBN1P35555 2871 aaKnown RBP19.07■□□□□ 0.64
CCDC9-204ENST00000599398 TRAV20A0A0B4J274 112 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 IGHV3-64DA0A0J9YX35 117 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 F5H5P2 479 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 MLNRO43193 412 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 HLA-DPB1P04440 258 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 OTX1P32242 354 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-204ENST00000599398 SLC15A1P46059 708 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 CDK5Q00535 292 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 TMEM236Q5W0B7 351 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 OR2AE1Q8NHA4 323 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 UTP4Q969X6 686 aaKnown RBP19.07■□□□□ 0.64
CCDC9-204ENST00000599398 ZMYND19Q96E35 227 aaPredicted RBP19.07■□□□□ 0.64
CCDC9-204ENST00000599398 GCM1Q9NP62 436 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 PAPOLBQ9NRJ5 636 aaKnown RBP19.07■□□□□ 0.64
CCDC9-204ENST00000599398 PCDHB10Q9UN67 800 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 MXRA5Q9NR99 2828 aa19.07■□□□□ 0.64
CCDC9-204ENST00000599398 PLPP2O43688 288 aa19.06■□□□□ 0.64
CCDC9-204ENST00000599398 IGHV2-70P01814 119 aa19.06■□□□□ 0.64
CCDC9-204ENST00000599398 HSD11B1P28845 292 aa19.06■□□□□ 0.64
CCDC9-204ENST00000599398 GRB2P62993 217 aaKnown RBP19.06■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms