RNA–Protein interactions for RNA: ENST00000593946.5

PNKP-203, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 1 (best)

Gene PNKP, Length 1,723 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-203ENST00000593946 FAM57BQ71RH2 274 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 NAA40Q86UY6 237 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 ZNF433Q8N7K0 673 aaPredicted RBP18.14■□□□□ 0.49
PNKP-203ENST00000593946 ORAI1Q96D31 301 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 NOX3Q9HBY0 568 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 TINAGQ9UJW2 476 aa18.14■□□□□ 0.49
PNKP-203ENST00000593946 A0A075B6Q4 140 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 NCR1O76036 304 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 UBL3O95164 117 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 ARR3P36575 388 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 RBPJQ06330 500 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 SFRP5Q5T4F7 317 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 CPEB3Q8NE35 698 aaKnown RBP18.13■□□□□ 0.49
PNKP-203ENST00000593946 BOD1Q96IK1 185 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 SFXN3Q9BWM7 321 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 DHDHQ9UQ10 334 aa18.13■□□□□ 0.49
PNKP-203ENST00000593946 A0A1B0GTI1 187 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 IQCMA0A1B0GVH7 501 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 ERVH48-1M5A8F1 160 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 COX5BP10606 129 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 CD79AP11912 226 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 PAX7P23759 505 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 TPTEP56180 551 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 HGFACQ04756 655 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 LY6DQ14210 128 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 TMEM53Q6P2H8 277 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 ZNF610Q8N9Z0 462 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 OR6Q1Q8NGQ2 317 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 OR51E1Q8TCB6 317 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 KCNS3Q9BQ31 491 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 OPN3Q9H1Y3 402 aaPredicted RBP18.12■□□□□ 0.49
PNKP-203ENST00000593946 B3GNT2Q9NY97 397 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 N6AMT1Q9Y5N5 214 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 POLEQ07864 2286 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 A0A0G2JK05 382 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 E9PLN8 166 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 LYZL6O75951 148 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 RAB3BP20337 219 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 RAB1AP62820 205 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 GABRA6Q16445 453 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 PCSK4Q6UW60 755 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 C1orf162Q8NEQ5 155 aaPredicted RBP18.12■□□□□ 0.49
PNKP-203ENST00000593946 NANOS1Q8WY41 292 aaKnown RBP18.12■□□□□ 0.49
PNKP-203ENST00000593946 PGAM5Q96HS1 289 aa18.12■□□□□ 0.49
PNKP-203ENST00000593946 C6orf62Q9GZU0 229 aaPredicted RBP18.12■□□□□ 0.49
PNKP-203ENST00000593946 A0A0U1RQV5 110 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 C5orf63A6NC05 138 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 SYT7O43581 403 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 RAD51DO75771 328 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 IGLV3-1P01715 115 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 CD2P06729 351 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 CCL1P22362 96 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 BMXP51813 675 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 OR10A3P58181 314 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 CEP78Q5JTW2 689 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 CCDC36Q8IYA8 594 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 OR13C3Q8NGS6 347 aa18.11■□□□□ 0.49
PNKP-203ENST00000593946 TRAV8-7A0A075B6U6 113 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 CIB4A0PJX0 185 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 INHBBP09529 407 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 P2RY6Q15077 328 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 GSG1Q2KHT4 349 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 STAC2Q6ZMT1 411 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 BEND4Q6ZU67 534 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 LUZP2Q86TE4 346 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 OR52H1Q8NGJ2 320 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 TCF7L1Q9HCS4 588 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 GPR84Q9NQS5 396 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 PCNX1Q96RV3 2341 aa18.1■□□□□ 0.49
PNKP-203ENST00000593946 A0A1B0GVI7 797 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 CFL1P23528 166 aaKnown RBP18.09■□□□□ 0.49
PNKP-203ENST00000593946 APEX1P27695 318 aaKnown RBP18.09■□□□□ 0.49
PNKP-203ENST00000593946 PMPCAQ10713 525 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 MOGQ16653 247 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 SNAI3Q3KNW1 292 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ASPHD2Q6ICH7 369 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 SFXN4Q6P4A7 337 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ZNF584Q8IVC4 421 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 CROCCP3Q8IVE0 287 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 AP3S1Q92572 193 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ZCCHC4Q9H5U6 513 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 SMURF1Q9HCE7 757 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ZNF275Q9NSD4 429 aaPredicted RBP18.09■□□□□ 0.49
PNKP-203ENST00000593946 CRNNQ9UBG3 495 aaPredicted RBP18.09■□□□□ 0.49
PNKP-203ENST00000593946 LOC100509620A0A075B734 347 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ANKRD61A6NGH8 418 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 LMX1BO60663 402 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 HOXB1P14653 301 aaPredicted RBP18.09■□□□□ 0.49
PNKP-203ENST00000593946 FSTP19883 344 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 PEX19P40855 299 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 LRRTM1Q86UE6 522 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 ZNF75AQ96N20 296 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 GFI1Q99684 422 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 SLITRK2Q9H156 845 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 OR10A2Q9H208 303 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 PEX16Q9Y5Y5 336 aa18.09■□□□□ 0.49
PNKP-203ENST00000593946 USP24Q9UPU5 2620 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 NOTOA8MTQ0 251 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 PDCD5O14737 125 aa18.08■□□□□ 0.48
PNKP-203ENST00000593946 TBX1O43435 398 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms