RNA–Protein interactions for RNA: ENST00000593049.5

DNMT1-229, Transcript of DNA methyltransferase 1, humanhuman

TSL 4

Gene DNMT1, Length 534 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-229ENST00000593049 HFEQ30201 348 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 USP51Q70EK9 711 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 OR8G5Q8NG78 346 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 OR13G1Q8NGZ3 307 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 RNF133Q8WVZ7 376 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 GTF3AQ92664 365 aaKnown RBP13.97□□□□□ -0.17
DNMT1-229ENST00000593049 YIPF5Q969M3 257 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 CIB1Q99828 191 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 ABHD6Q9BV23 337 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 MSL2Q9HCI7 577 aa13.97□□□□□ -0.17
DNMT1-229ENST00000593049 ZNF275Q9NSD4 429 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-229ENST00000593049 H2AFY2Q9P0M6 372 aaPredicted RBP13.97□□□□□ -0.17
DNMT1-229ENST00000593049 NOP16Q9Y3C1 178 aaKnown RBP13.97□□□□□ -0.17
DNMT1-229ENST00000593049 YLPM1P49750 1951 aaKnown RBP13.96□□□□□ -0.17
DNMT1-229ENST00000593049 CSPG4Q6UVK1 2322 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 IGHV4-61A0A0C4DH41 118 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 SAC3D1A6NKF1 404 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 IQCF6A8MYZ5 107 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 H3BNX3 289 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 PPIHO43447 177 aaKnown RBP13.96□□□□□ -0.17
DNMT1-229ENST00000593049 LYNP07948 512 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 PSKH1P11801 424 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 SLC2A5P22732 501 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 TNFAIP6P98066 277 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-229ENST00000593049 APOFQ13790 326 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 C12orf73Q69YU5 71 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 OR2T2Q6IF00 324 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 PGAP1Q75T13 922 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 MRPL21Q7Z2W9 205 aaKnown RBP13.96□□□□□ -0.17
DNMT1-229ENST00000593049 ZNF283Q8N7M2 679 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 OR2Z1Q8NG97 314 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 OTOSQ8NHW6 89 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 TIMD4Q96H15 378 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 TEAD3Q99594 435 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 PKP2Q99959 881 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 GABARAPL3Q9BY60 117 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 YIPF3Q9GZM5 350 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 IL19Q9UHD0 177 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 TMEFF2Q9UIK5 374 aaPredicted RBP13.96□□□□□ -0.17
DNMT1-229ENST00000593049 HIVEP2P31629 2446 aa13.96□□□□□ -0.17
DNMT1-229ENST00000593049 NSD1Q96L73 2696 aaPredicted RBP13.96□□□□□ -0.18
DNMT1-229ENST00000593049 SLC22A31A6NKX4 558 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 CLDN25C9JDP6 229 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 XRCC2O43543 280 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 LILRA1O75019 489 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 H2BFMP0C1H6 154 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 IGHV4-31P0DP07 118 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 PRKXP51817 358 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 GK2Q14410 553 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-229ENST00000593049 NXNL2Q5VZ03 156 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 SLC16A9Q7RTY1 509 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 NAA40Q86UY6 237 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-229ENST00000593049 GID4Q8IVV7 300 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 BBS1Q8NFJ9 593 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 TMEM163Q8TC26 289 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 NIPAL2Q9H841 368 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 TMEM14AQ9Y6G1 99 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 ABCA1O95477 2261 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 SETD2Q9BYW2 2564 aaPredicted RBP13.95□□□□□ -0.18
DNMT1-229ENST00000593049 TLN2Q9Y4G6 2542 aa13.95□□□□□ -0.18
DNMT1-229ENST00000593049 IFNL4K9M1U5 179 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 PRKYO43930 277 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 SELENOFO60613 162 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 CDC14BO60729 498 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 CFL1P23528 166 aaKnown RBP13.94□□□□□ -0.18
DNMT1-229ENST00000593049 OPRL1P41146 370 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 CX3CR1P49238 355 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 RAD23AP54725 363 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 EFNB1P98172 346 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 C6orf52Q5T4I8 152 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 KCTD18Q6PI47 426 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-229ENST00000593049 Q6ZR03 302 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 SPATC1Q76KD6 591 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 PEG10Q86TG7 708 aaKnown RBP13.94□□□□□ -0.18
DNMT1-229ENST00000593049 OR5AS1Q8N127 324 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 TCEANCQ8N8B7 351 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 OR52H1Q8NGJ2 320 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 THEM6Q8WUY1 208 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 SPRYD4Q8WW59 207 aaPredicted RBP13.94□□□□□ -0.18
DNMT1-229ENST00000593049 RAB1CQ92928 201 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 SLC30A2Q9BRI3 323 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 SLC22A4Q9H015 551 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 RIBC2Q9H4K1 309 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 S100A14Q9HCY8 104 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 YAE1D1Q9NRH1 226 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 TMEM100Q9NV29 134 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 USE1Q9NZ43 259 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 LAMP5Q9UJQ1 280 aa13.94□□□□□ -0.18
DNMT1-229ENST00000593049 NIPBLQ6KC79 2804 aaeCLIP13.94□□□□□ -0.18
DNMT1-229ENST00000593049 TANC2Q9HCD6 1990 aa13.93□□□□□ -0.18
DNMT1-229ENST00000593049 C2CD3Q4AC94 2353 aa13.93□□□□□ -0.18
DNMT1-229ENST00000593049 A8MV72 311 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-229ENST00000593049 ALPLP05186 524 aa13.93□□□□□ -0.18
DNMT1-229ENST00000593049 ANXA2P07355 339 aaKnown RBP13.93□□□□□ -0.18
DNMT1-229ENST00000593049 EPHA2P29317 976 aa13.93□□□□□ -0.18
DNMT1-229ENST00000593049 NAA10P41227 235 aaPredicted RBP13.93□□□□□ -0.18
DNMT1-229ENST00000593049 SRP9P49458 86 aaKnown RBP13.93□□□□□ -0.18
DNMT1-229ENST00000593049 ALDH3A2P51648 485 aa13.93□□□□□ -0.18
DNMT1-229ENST00000593049 CDC42P60953 191 aa13.93□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms