RNA–Protein interactions for RNA: ENST00000588419.1

HDAC5-208, Transcript of histone deacetylase 5, humanhuman

TSL 2

Gene HDAC5, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC5-208ENST00000588419 DEFB112Q30KQ8 113 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 GPR157Q5UAW9 335 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 SFRP4Q6FHJ7 346 aaPredicted RBP11.44□□□□□ -0.58
HDAC5-208ENST00000588419 GLYATQ6IB77 296 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 MRPL21Q7Z2W9 205 aaKnown RBP11.44□□□□□ -0.58
HDAC5-208ENST00000588419 LNX2Q8N448 690 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 RNF148Q8N7C7 305 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 FAM86B1Q8N7N1 296 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 SPRYD4Q8WW59 207 aaPredicted RBP11.44□□□□□ -0.58
HDAC5-208ENST00000588419 TMIGD2Q96BF3 282 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 ATF6BQ99941 703 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 OR52D1Q9H346 318 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 MARCH7Q9H992 704 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 EFCAB1Q9HAE3 211 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 ADA2Q9NZK5 511 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 NDUFAF4Q9P032 175 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 B9D1Q9UPM9 204 aa11.44□□□□□ -0.58
HDAC5-208ENST00000588419 OR10H3O60404 316 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 CCDC22O60826 627 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 CRYBA1P05813 215 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 ACSM4P0C7M7 580 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 HIST1H1CP16403 213 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 MDH1P40925 334 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 RPS27P42677 84 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 PSME3P61289 254 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 DEFA6Q01524 100 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 COX10Q12887 443 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 TRAP1Q12931 704 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 GK2Q14410 553 aaPredicted RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 TUSC1Q2TAM9 212 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 SLC36A3Q495N2 470 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 WDR25Q64LD2 544 aaPredicted RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 SLC18B1Q6NT16 456 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 C16orf87Q6PH81 154 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 FIP1L1Q6UN15 594 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 DCDC5Q6ZRR9 648 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 PGAP1Q75T13 922 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 NAA40Q86UY6 237 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 OR6V1Q8N148 313 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 FITM2Q8N6M3 262 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 ADAT1Q9BUB4 502 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 SAMD4AQ9UPU9 718 aaKnown RBP11.43□□□□□ -0.58
HDAC5-208ENST00000588419 N6AMT1Q9Y5N5 214 aa11.43□□□□□ -0.58
HDAC5-208ENST00000588419 MGAM2Q2M2H8 2515 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 FAM181BA6NEQ2 426 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 C22orf46C9J442 243 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 C3orf80F5H4A9 247 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 CLDN34H7C241 214 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 NDUFAB1O14561 156 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 ENSAO43768 121 aaKnown RBP11.42□□□□□ -0.58
HDAC5-208ENST00000588419 GADD45GO95257 159 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 TXNDC12O95881 172 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 KNG1P01042 644 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 SFTPBP07988 381 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 CA6P23280 308 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 GGT2P36268 569 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 HIST1H3AP68431 136 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 SRSF4Q08170 494 aaKnown RBP11.42□□□□□ -0.58
HDAC5-208ENST00000588419 MAB21L1Q13394 359 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 OR8B8Q15620 311 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 MPPED2Q15777 294 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 ZNF181Q2M3W8 571 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 SLC35F1Q5T1Q4 408 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 C8orf82Q6P1X6 216 aaPredicted RBP11.42□□□□□ -0.58
HDAC5-208ENST00000588419 C17orf107Q6ZR85 190 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 C9orf139Q6ZV77 190 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 HIST2H3AQ71DI3 136 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 KIR3DL3Q8N743 410 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 SLC26A10Q8NG04 563 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 OR2AE1Q8NHA4 323 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 KIF17Q9P2E2 1029 aa11.42□□□□□ -0.58
HDAC5-208ENST00000588419 KIR2DS1A0A191URI9 304 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 hCG_1807616A0A1W2PRN6 198 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 GGT3PA6NGU5 568 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 A6NLC8 198 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 POM121CA8CG34 1229 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 M0R135 149 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 PHYHO14832 338 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 ADAM20O43506 726 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 PPIAL4GP0DN37 164 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 ZNF823P16415 610 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 PYCR1P32322 319 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 CD200P41217 278 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 RAG2P55895 527 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 TPTEP56180 551 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.41□□□□□ -0.58
HDAC5-208ENST00000588419 RFX4Q33E94 735 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 SNAI3Q3KNW1 292 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 MIDNQ504T8 468 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 CLEC12AQ5QGZ9 265 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 ZNF799Q96GE5 643 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 FN3KRPQ9HA64 309 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 SPAG4Q9NPE6 437 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 ERVK-18Q9QC07 812 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 ABCD2Q9UBJ2 740 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 CTSZQ9UBR2 303 aa11.41□□□□□ -0.58
HDAC5-208ENST00000588419 TRRAPQ9Y4A5 3859 aa11.4□□□□□ -0.58
HDAC5-208ENST00000588419 OR6C68A6NDL8 312 aa11.4□□□□□ -0.58
HDAC5-208ENST00000588419 TVP23AA6NH52 213 aa11.4□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms