RNA–Protein interactions for RNA: ENST00000564236.1

CCNF-203, Transcript of cyclin F, humanhuman

TSL 3

Gene CCNF, Length 789 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNF-203ENST00000564236 CYB5R3P00387 301 aaPredicted RBP13.99□□□□□ -0.17
CCNF-203ENST00000564236 PLATP00750 562 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 FABP3P05413 133 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 RRM2P31350 389 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 RPL13AP3Q6NVV1 102 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 PGBD2Q6P3X8 592 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 RBMS3Q6XE24 437 aaKnown RBP13.99□□□□□ -0.17
CCNF-203ENST00000564236 GNPDA2Q8TDQ7 276 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 RAB40AQ8WXH6 277 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 NEIL1Q96FI4 390 aaPredicted RBP13.99□□□□□ -0.17
CCNF-203ENST00000564236 MAP6Q96JE9 813 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 NSMCE2Q96MF7 247 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 ZNF48Q96MX3 618 aaPredicted RBP13.99□□□□□ -0.17
CCNF-203ENST00000564236 PITX2Q99697 317 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 SLC22A4Q9H015 551 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 NSRP1Q9H0G5 558 aaKnown RBP13.99□□□□□ -0.17
CCNF-203ENST00000564236 IL20Q9NYY1 176 aa13.99□□□□□ -0.17
CCNF-203ENST00000564236 IGHV2-70DA0A0C4DH43 119 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 KIR2DS1A0A191URI9 304 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 SPRY1O43609 319 aaPredicted RBP13.98□□□□□ -0.17
CCNF-203ENST00000564236 RNASE1P07998 156 aaKnown RBP13.98□□□□□ -0.17
CCNF-203ENST00000564236 RPS2P15880 293 aaKnown RBP13.98□□□□□ -0.17
CCNF-203ENST00000564236 NOS3P29474 1203 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 CENPAP49450 140 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 FOXL1Q12952 345 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 PCK2Q16822 640 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 ZNF362Q5T0B9 420 aaPredicted RBP13.98□□□□□ -0.17
CCNF-203ENST00000564236 MOGAT3Q86VF5 341 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 LINC00346Q8IVM7 164 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 LINC00471Q8N535 108 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 PLPP7Q8NBV4 271 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 BHLHE23Q8NDY6 225 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 SDR9C7Q8NEX9 313 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 OR10S1Q8NGN2 331 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 OR2AJ1Q8NGZ0 328 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 PLEKHA8Q96JA3 519 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 ZNF747Q9BV97 191 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 CDADC1Q9BWV3 514 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 TRIM15Q9C019 465 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 PRDM13Q9H4Q3 707 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 WDR76Q9H967 626 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 TMCC3Q9ULS5 477 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 NOP16Q9Y3C1 178 aaKnown RBP13.98□□□□□ -0.17
CCNF-203ENST00000564236 PPIAL4AQ9Y536 164 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 CDH10Q9Y6N8 788 aa13.98□□□□□ -0.17
CCNF-203ENST00000564236 ARHGAP32A7KAX9 2087 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 DNAJC9-AS1A6NH13 148 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 F5H5K5 113 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 PHYHO14832 338 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 PSMB10P40306 273 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 MAGEA2P43356 314 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 TPTEP56180 551 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 GNB2P62879 340 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 DBPQ10586 325 aaPredicted RBP13.97□□□□□ -0.17
CCNF-203ENST00000564236 MALLQ13021 153 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 CLEC12AQ5QGZ9 265 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 ZNF770Q6IQ21 691 aaPredicted RBP13.97□□□□□ -0.17
CCNF-203ENST00000564236 BTNL3Q6UXE8 466 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 ZNF841Q6ZN19 808 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 DCDC5Q6ZRR9 648 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.97□□□□□ -0.17
CCNF-203ENST00000564236 NAA40Q86UY6 237 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 BCL6BQ8N143 479 aaPredicted RBP13.97□□□□□ -0.17
CCNF-203ENST00000564236 OR52E2Q8NGJ4 325 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 NDE1Q9NXR1 346 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 TAGLN3Q9UI15 199 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 LYVE1Q9Y5Y7 322 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 V9GYQ6 96 aa13.97□□□□□ -0.17
CCNF-203ENST00000564236 M0R135 149 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 HLA-DPB1P04440 258 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.96□□□□□ -0.17
CCNF-203ENST00000564236 PRR31Q5SQ13 230 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 DRAM2Q6UX65 266 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 PGAP1Q75T13 922 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 NLRC3Q7RTR2 1065 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 ZDHHC21Q8IVQ6 265 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 PARP8Q8N3A8 854 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 OR8B3Q8NGG8 313 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 OR4C15Q8NGM1 316 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 OR2T4Q8NH00 348 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 SPTSSAQ969W0 71 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 SLCO4A1Q96BD0 722 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 ZNF799Q96GE5 643 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 OR8B2Q96RD0 313 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 CDRT15Q96T59 188 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 BTBD10Q9BSF8 475 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 FN3KQ9H479 309 aa13.96□□□□□ -0.17
CCNF-203ENST00000564236 CD300LBA8K4G0 201 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 GMDSO60547 372 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 ZNF205O95201 554 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 HLA-DQA2P01906 255 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 LCATP04180 440 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 IGHV4-38-2P0DP08 117 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 MSX2P35548 267 aaPredicted RBP13.95□□□□□ -0.18
CCNF-203ENST00000564236 MTNR1AP48039 350 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 PITPNBP48739 271 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 BPIFB3P59826 476 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 TEX30Q5JUR7 227 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 SLC35F1Q5T1Q4 408 aa13.95□□□□□ -0.18
CCNF-203ENST00000564236 WDR25Q64LD2 544 aaPredicted RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms