RNA–Protein interactions for RNA: ENST00000563226.1

SMPD3-203, Transcript of sphingomyelin phosphodiesterase 3, humanhuman

TSL 1 (best) BASIC

Gene SMPD3, Length 2,093 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD3-203ENST00000563226 CCDC92Q53HC0 331 aaPredicted RBP16.83■□□□□ 0.28
SMPD3-203ENST00000563226 BTN2A1Q7KYR7 527 aa16.83■□□□□ 0.28
SMPD3-203ENST00000563226 ZC3HAV1Q7Z2W4 902 aaKnown RBP16.83■□□□□ 0.28
SMPD3-203ENST00000563226 ADGRE4PQ86SQ3 457 aa16.83■□□□□ 0.28
SMPD3-203ENST00000563226 AKAP1Q92667 903 aaKnown RBP eCLIP16.83■□□□□ 0.28
SMPD3-203ENST00000563226 FAM71F1Q96KD3 344 aaPredicted RBP16.83■□□□□ 0.28
SMPD3-203ENST00000563226 CNTD2Q9H8S5 307 aa16.83■□□□□ 0.28
SMPD3-203ENST00000563226 SLC17A5Q9NRA2 495 aa16.83■□□□□ 0.28
SMPD3-203ENST00000563226 C7orf66A4D0T2 115 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 DHFRP00374 187 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 AIMP2Q13155 320 aaKnown RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 RSPO1Q2MKA7 263 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 ZNF529Q6P280 563 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 PLXDC2Q6UX71 529 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 DTX1Q86Y01 620 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 GJC3Q8NFK1 279 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 INTS12Q96CB8 462 aaKnown RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 FBXO17Q96EF6 278 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 RNF170Q96K19 258 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 GHITMQ9H3K2 345 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 COPZ2Q9P299 210 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 FLVCR2Q9UPI3 526 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 SPAARA0A1B0GVQ0 90 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 MEIS3P1A6NDR6 274 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 FAM166BA8MTA8 275 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 TPPPO94811 219 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 H2AFB2P0C5Z0 115 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 AP3S2P59780 193 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 HIST1H3AP68431 136 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 CSRP2Q16527 193 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 RSPO4Q2I0M5 234 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 HIST2H3PS2Q5TEC6 136 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 OLFML2AQ68BL7 652 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 HIST2H3AQ71DI3 136 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 ABHD3Q8WU67 409 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 C15orf40Q8WUR7 153 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 ALKBH3Q96Q83 286 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 C20orf85Q9H1P6 137 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 TP63Q9H3D4 680 aaPredicted RBP16.82■□□□□ 0.28
SMPD3-203ENST00000563226 BEX1Q9HBH7 125 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 NKIRAS2Q9NYR9 191 aa16.82■□□□□ 0.28
SMPD3-203ENST00000563226 F5H5K5 113 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 H7C417 338 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 FCER2P06734 321 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 GABRA1P14867 456 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 ZNF20P17024 532 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 ZNF84P51523 738 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 MOGAT2Q3SYC2 334 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 SORCS2Q96PQ0 1159 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 SPACA5Q96QH8 159 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 CRLF2Q9HC73 371 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 TMEM138Q9NPI0 162 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 ABI3Q9P2A4 366 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 MTFP1Q9UDX5 166 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 PAIP2BQ9ULR5 123 aaKnown RBP16.81■□□□□ 0.28
SMPD3-203ENST00000563226 EP300Q09472 2414 aaPredicted RBP16.81■□□□□ 0.28
SMPD3-203ENST00000563226 DBHP09172 617 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 CCL1P22362 96 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 CTSSP25774 331 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 MAGEA5P43359 124 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 FCN2Q15485 313 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 GSG1Q2KHT4 349 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 AAED1Q7RTV5 226 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 GLRX5Q86SX6 157 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 CAPSLQ8WWF8 208 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 PHF21AQ96BD5 680 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 MS4A3Q96HJ5 214 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 LYZL4Q96KX0 146 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 TTTY12Q9BZ98 90 aa16.81■□□□□ 0.28
SMPD3-203ENST00000563226 GSTT2BP0CG30 244 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 RAB3AP20336 220 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 MRPS34P82930 218 aaKnown RBP16.8■□□□□ 0.28
SMPD3-203ENST00000563226 IFITM2Q01629 132 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 PCGF3Q3KNV8 242 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 TCTE3Q8IZS6 198 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 OR5AS1Q8N127 324 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 BEST4Q8NFU0 473 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 OR5D14Q8NGL3 314 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 GIMAP1Q8WWP7 306 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 ITFG2Q969R8 447 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 PGAM5Q96HS1 289 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 SLC6A15Q9H2J7 730 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 MOV10Q9HCE1 1003 aaKnown RBP16.8■□□□□ 0.28
SMPD3-203ENST00000563226 ELF5Q9UKW6 265 aaPredicted RBP16.8■□□□□ 0.28
SMPD3-203ENST00000563226 BOLA1Q9Y3E2 137 aa16.8■□□□□ 0.28
SMPD3-203ENST00000563226 SMLR1H3BR10 107 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 CYTIPO60759 359 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 RBBP9O75884 186 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 HPNP05981 417 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 FTH1P19P0C7X4 201 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 LHX2P50458 406 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 SRYQ05066 204 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 LINC00303Q3SY05 128 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 ELFN2Q5R3F8 820 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 ZNF627Q7L945 461 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 NOXA1Q86UR1 476 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 CLEC1AQ8NC01 280 aa16.79■□□□□ 0.28
SMPD3-203ENST00000563226 FOXRED1Q96CU9 486 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 METTL17Q9H7H0 456 aaPredicted RBP16.79■□□□□ 0.28
SMPD3-203ENST00000563226 DMXL1Q9Y485 3027 aa16.79■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms