RNA–Protein interactions for RNA: ENST00000550629.1

SCAF11-213, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-213ENST00000550629 PHF3Q92576 2039 aaKnown RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 NBASA2RRP1 2371 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SVILO95425 2214 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 IRGMA1A4Y4 181 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 OR5H1A6NKK0 313 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 FAM183AA6NL82 134 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 C12orf71A8MTZ7 269 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 H7C1C5 153 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 DENRO43583 198 aaKnown RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 TMCC2O75069 709 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 UBL3O95164 117 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SLC2A10O95528 541 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 IGHV3-9P01782 118 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 CST2P09228 141 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 GNAO1P09471 354 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 GABRB1P18505 474 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 IL32P24001 234 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 FMO3P31513 532 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 MTNR1AP48039 350 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 CXCR4P61073 352 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ISL1P61371 349 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 LCN6P62502 163 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 HOXA4Q00056 320 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 IL5RAQ01344 420 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 HSF2Q03933 536 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 FMODQ06828 376 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 TFF3Q07654 80 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 MAD2L1BPQ15013 274 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SRSF7Q16629 238 aaKnown RBP eCLIP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 PCK2Q16822 640 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SLC36A2Q495M3 483 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 TIMM23BQ5SRD1 257 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 PHYHD1Q5SRE7 291 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 C6orf52Q5T4I8 152 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 KLHL24Q6TFL4 600 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF813Q6ZN06 617 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF66Q6ZN08 573 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 NCCRP1Q6ZVX7 275 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 MEPCEQ7L2J0 689 aaKnown RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 BHLHA15Q7RTS1 189 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 LUZP2Q86TE4 346 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 EGFL6Q8IUX8 553 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ENTHD1Q8IYW4 607 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SLC22A24Q8N4F4 322 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 OR9Q1Q8NGQ5 310 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 OR1K1Q8NGR3 316 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SSC4DQ8WTU2 575 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 IPCEF1Q8WWN9 437 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 NSMAFQ92636 917 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 BCL2L2Q92843 193 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 NABP1Q96AH0 204 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF582Q96NG8 517 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 MYCBPQ99417 103 aaPredicted RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 TEAD3Q99594 435 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 HCAR1Q9BXC0 346 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 HINT3Q9NQE9 182 aaKnown RBP4.99□□□□□ -1.61
SCAF11-213ENST00000550629 POLE4Q9NR33 117 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 SLC17A5Q9NRA2 495 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 PLCXD1Q9NUJ7 323 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF226Q9NYT6 803 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ATPIF1Q9UII2 106 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 AMDHD2Q9Y303 409 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 LRRC42Q9Y546 428 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 PCDHGB1Q9Y5G3 927 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 DOCK7Q96N67 2140 aa4.99□□□□□ -1.61
SCAF11-213ENST00000550629 ARHGAP21Q5T5U3 1957 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 MPDZO75970 2070 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 IGKV1D-43A0A0B4J1Z2 117 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 CIB4A0PJX0 185 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 NKX2-6A6NCS4 301 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 M0R129 80 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 DCTN6O00399 190 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ENTPD6O75354 484 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 WBP4O75554 376 aaKnown RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 LYZL6O75951 148 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 GOSR1O95249 250 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 FADS2O95864 444 aaKnown RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TFP02787 698 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 GYPBP06028 91 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 B4GALT1P15291 398 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ZNF823P16415 610 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 IGFBP2P18065 325 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 PYCR1P32322 319 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ARR3P36575 388 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 CDH11P55287 796 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 UBE2NP61088 152 aaKnown RBP4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ACTC1P68032 377 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ACTA1P68133 377 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TUBA4AP68366 448 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 HIST1H3AP68431 136 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 GTF3C1Q12789 2109 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 RAB40BQ12829 278 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 ECH1Q13011 328 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 AQP6Q13520 282 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 APOFQ13790 326 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 SGCAQ16586 387 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 TBRG1Q3YBR2 411 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 KLHL12Q53G59 568 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 KLHL22Q53GT1 634 aa4.98□□□□□ -1.61
SCAF11-213ENST00000550629 HIST2H3PS2Q5TEC6 136 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms