RNA–Protein interactions for RNA: ENST00000540763.5

DDX55-207, Transcript of DEAD-box helicase 55, humanhuman

TSL 3

Gene DDX55, Length 799 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-207ENST00000540763 MS4A5Q9H3V2 200 aa16.65■□□□□ 0.26
DDX55-207ENST00000540763 DYNLRB1Q9NP97 96 aa16.65■□□□□ 0.26
DDX55-207ENST00000540763 DUSP13Q9UII6 198 aa16.65■□□□□ 0.26
DDX55-207ENST00000540763 COPS3Q9UNS2 423 aa16.65■□□□□ 0.26
DDX55-207ENST00000540763 PCDHGB1Q9Y5G3 927 aa16.65■□□□□ 0.26
DDX55-207ENST00000540763 A0A1W2PPW3 197 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 LCATP04180 440 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ERCC1P07992 297 aaPredicted RBP16.64■□□□□ 0.25
DDX55-207ENST00000540763 RAC2P15153 192 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 KITLGP21583 273 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 MPV17P39210 176 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 CX3CR1P49238 355 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ATP5J2P56134 94 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ACTC1P68032 377 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ACTA1P68133 377 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 IL5RAQ01344 420 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 MALLQ13021 153 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 SPATA46Q5T0L3 261 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 SHEQ5VZ18 495 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 LRP11Q86VZ4 500 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ZNF679Q8IYX0 411 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 ZNF283Q8N7M2 679 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 OR52H1Q8NGJ2 320 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 OPA3Q9H6K4 179 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 MYEF2Q9P2K5 600 aaKnown RBP16.64■□□□□ 0.25
DDX55-207ENST00000540763 FZR1Q9UM11 496 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 LRP12Q9Y561 859 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 USF3Q68DE3 2245 aa16.64■□□□□ 0.25
DDX55-207ENST00000540763 CLPTM1O96005 669 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 MT-ND5P03915 603 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 ATP6V1E1P36543 226 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 PRKXP51817 358 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 PSMA6P60900 246 aaKnown RBP16.63■□□□□ 0.25
DDX55-207ENST00000540763 CXCR4P61073 352 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 ISL1P61371 349 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 ZNF91Q05481 1191 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 NKPD1Q17RQ9 610 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 ZMAT1Q5H9K5 638 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 LRRN1Q6UXK5 716 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 USP51Q70EK9 711 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 SPATC1Q76KD6 591 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 C8orf59Q8N0T1 100 aaPredicted RBP16.63■□□□□ 0.25
DDX55-207ENST00000540763 SNX33Q8WV41 574 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 APH1BQ8WW43 257 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 TFAP2CQ92754 450 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 HAVCR1Q96D42 359 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 RNFT2Q96EX2 444 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 PERPQ96FX8 193 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 RAB1BQ9H0U4 201 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 POFUT1Q9H488 388 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 CYSLTR2Q9NS75 346 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 MRPS18AQ9NVS2 196 aaKnown RBP16.63■□□□□ 0.25
DDX55-207ENST00000540763 TAAR3PQ9P1P4 343 aa16.63■□□□□ 0.25
DDX55-207ENST00000540763 EXOGQ9Y2C4 368 aaKnown RBP16.63■□□□□ 0.25
DDX55-207ENST00000540763 RPL36Q9Y3U8 105 aaKnown RBP16.63■□□□□ 0.25
DDX55-207ENST00000540763 ACOD1A6NK06 481 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 XRCC2O43543 280 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 WBP4O75554 376 aaKnown RBP16.62■□□□□ 0.25
DDX55-207ENST00000540763 DBTP11182 482 aaKnown RBP16.62■□□□□ 0.25
DDX55-207ENST00000540763 HSPA13P48723 471 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 HCCSP53701 268 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 AQP4P55087 323 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 ZNF322Q6U7Q0 402 aaPredicted RBP16.62■□□□□ 0.25
DDX55-207ENST00000540763 PRSS45Q7RTY3 260 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 NAA40Q86UY6 237 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 MYCBPQ99417 103 aaPredicted RBP16.62■□□□□ 0.25
DDX55-207ENST00000540763 PTTG3PQ9NZH4 202 aa16.62■□□□□ 0.25
DDX55-207ENST00000540763 PURGQ9UJV8 347 aaKnown RBP16.62■□□□□ 0.25
DDX55-207ENST00000540763 J3QRE1 110 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 CLIC3O95833 236 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 IGHV4-39P01824 125 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 ADH4P08319 380 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 SELEP16581 610 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 MMP15P51511 669 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 RIDAP52758 137 aaKnown RBP16.61■□□□□ 0.25
DDX55-207ENST00000540763 EFNA4P52798 201 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 ZNF121P58317 390 aaPredicted RBP16.61■□□□□ 0.25
DDX55-207ENST00000540763 RAB40BQ12829 278 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 PSG7Q13046 419 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 ZNF829Q3KNS6 432 aaPredicted RBP16.61■□□□□ 0.25
DDX55-207ENST00000540763 SNAI3Q3KNW1 292 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 RFLNBQ8N5W9 214 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 FBLIM1Q8WUP2 373 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 NEU4Q8WWR8 484 aaPredicted RBP16.61■□□□□ 0.25
DDX55-207ENST00000540763 SPSB4Q96A44 273 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 CMBLQ96DG6 245 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 SORCS2Q96PQ0 1159 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 RGCCQ9H4X1 137 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 NKIRAS2Q9NYR9 191 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 ZNF391Q9UJN7 358 aa16.61■□□□□ 0.25
DDX55-207ENST00000540763 ZFHX3Q15911 3703 aa16.6■□□□□ 0.25
DDX55-207ENST00000540763 A0A1W2PQL4 384 aaPredicted RBP16.6■□□□□ 0.25
DDX55-207ENST00000540763 PLSCR5A0PG75 271 aa16.6■□□□□ 0.25
DDX55-207ENST00000540763 PRR32B1ATL7 298 aa16.6■□□□□ 0.25
DDX55-207ENST00000540763 TIMM8AO60220 97 aaPredicted RBP16.6■□□□□ 0.25
DDX55-207ENST00000540763 SULT1C4O75897 302 aa16.6■□□□□ 0.25
DDX55-207ENST00000540763 ANXA2P07355 339 aaKnown RBP16.6■□□□□ 0.25
DDX55-207ENST00000540763 ADRA2AP08913 450 aa16.6■□□□□ 0.25
DDX55-207ENST00000540763 CFL1P23528 166 aaKnown RBP16.6■□□□□ 0.25
DDX55-207ENST00000540763 ALDH3B1P43353 468 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 68.8 ms