RNA–Protein interactions for RNA: ENST00000538570.5

COL4A6-208, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best) BASIC

Gene COL4A6, Length 6,528 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-208ENST00000538570 SPANXN5Q5MJ07 72 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 NCMAPQ5T1S8 102 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 LIPNQ5VXI9 398 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 RPL7L1Q6DKI1 246 aaKnown RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CDC20BQ86Y33 519 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 NKAIN4Q8IVV8 208 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SLC38A9Q8NBW4 561 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CPEB3Q8NE35 698 aaKnown RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 UBE2FQ969M7 185 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 RHOVQ96L33 236 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 CHST11Q9NPF2 352 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 KCND3Q9UK17 655 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SOCS7O14512 581 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 MGMTP16455 207 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 SOWAHCQ53LP3 525 aaPredicted RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 LEMD1Q68G75 181 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 RPUSD3Q6P087 351 aaKnown RBP9.07□□□□□ -0.96
COL4A6-208ENST00000538570 DHRS4L2Q6PKH6 230 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 PAQR9Q6ZVX9 377 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 OLIG3Q7RTU3 272 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 FUNDC1Q8IVP5 155 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 NDFIP1Q9BT67 221 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 KIAA1456Q9P272 454 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 HCFC2Q9Y5Z7 792 aa9.07□□□□□ -0.96
COL4A6-208ENST00000538570 ZNF749O43361 778 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 SDHAP31040 664 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 CCKARP32238 428 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 RTL8BQ17RB0 113 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 Q1RN00 199 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR2B11Q5JQS5 317 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TMEM81Q6P7N7 255 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TMEM123Q8N131 208 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 BATF2Q8N1L9 274 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ZFP62Q8NB50 900 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR13D1Q8NGV5 346 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR51F2Q8NH61 342 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 C11orf40Q8WZ69 217 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 MBOAT4Q96T53 435 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 H3BNC9 293 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 PLPP1O14494 284 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 B4GALT3O60512 393 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 CCL11P51671 97 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 B2MP61769 119 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 RPS23P62266 143 aaKnown RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 DGCR2P98153 550 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 DUSP5Q16690 384 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ALKAL1Q6UXT8 129 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TMEM99Q8N816 258 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR10P1Q8NGE3 313 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR51E1Q8TCB6 317 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 SIRT7Q9NRC8 400 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 POLDIP2Q9Y2S7 368 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 LNP1A1A4G5 178 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 XKRY2A2RUG3 117 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 AP4M1O00189 453 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ARPC3O15145 178 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 SNCGO76070 127 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 STAG3L2P0CL84 134 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TGFBR1P36897 503 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 GPR12P47775 334 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TIGITQ495A1 244 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR4A47Q6IF82 309 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 LCN15Q6UWW0 184 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ZADH2Q8N4Q0 377 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TCTEX1D1Q8N7M0 179 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR5M1Q8NGP8 315 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TIMD4Q96H15 378 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 TEX37Q96LM6 180 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 NXF2Q9GZY0 626 aaKnown RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 CTSFQ9UBX1 484 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ZC3H12DA2A288 527 aaKnown RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 ST8SIA5O15466 376 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 CD1EP15812 388 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 PSMB6P28072 239 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR2A2Q6IF42 318 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 UQCC3Q6UW78 93 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 SLAMF6Q96DU3 332 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 NOL4LQ96MY1 436 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OPALINQ96PE5 141 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 SOX18P35713 384 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 RBM45Q8IUH3 476 aaKnown RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 MFSD4AQ8N468 514 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR10G3Q8NGC4 313 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR10X1Q8NGY0 326 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 OR2A14Q96R47 310 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 AHDC1Q5TGY3 1603 aaPredicted RBP9.06□□□□□ -0.96
COL4A6-208ENST00000538570 MYH1P12882 1939 aa9.06□□□□□ -0.96
COL4A6-208ENST00000538570 E5RGE8 158 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 M0R082 166 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 TGM1P22735 817 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 ISL1P61371 349 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 EDAQ92838 391 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 DUS3LQ96G46 650 aaKnown RBP9.05□□□□□ -0.96
COL4A6-208ENST00000538570 GABARAPL1Q9H0R8 117 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 ACER3Q9NUN7 267 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 NSG2Q9Y328 171 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 SCN11AQ9UI33 1791 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 A0A1B0GTW7 788 aa9.05□□□□□ -0.96
COL4A6-208ENST00000538570 GUSBP08236 651 aa9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 807.9 ms