RNA–Protein interactions for RNA: ENST00000536782.2

TNFRSF1B-204, Transcript of TNF receptor superfamily member 1B, humanhuman

TSL 1 (best) BASIC

Gene TNFRSF1B, Length 557 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-204ENST00000536782 KRTAP27-1Q3LI81 207 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SLC36A3Q495N2 470 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 C9orf139Q6ZV77 190 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 LINC00346Q8IVM7 164 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR2AJ1Q8NGZ0 328 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR4K13Q8NH42 304 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PITX2Q99697 317 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR52D1Q9H346 318 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ZNF696Q9H7X3 374 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ARL2BPQ9Y2Y0 163 aa16.45■□□□□ 0.22
TNFRSF1B-204ENST00000536782 KIR2DS1A0A191URI9 304 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 F5H5K5 113 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 KCNAB3O43448 404 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 GADD45GO95257 159 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PLATP00750 562 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ACSM4P0C7M7 580 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 HIST1H1CP16403 213 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 NOS3P29474 1203 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PMELP40967 661 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PITPNBP48739 271 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 IL13RA1P78552 427 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 MALLQ13021 153 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 GK2Q14410 553 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SLC9A3R2Q15599 337 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 FAM201AQ5SY85 155 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SLC18B1Q6NT16 456 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CFAP77Q6ZQR2 320 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CELF2-AS1Q8N7Q2 184 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 DACT3Q96B18 629 aaPredicted RBP16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ATF6BQ99941 703 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 IFT27Q9BW83 186 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 UNKLQ9H9P5 680 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 RPRD1BQ9NQG5 326 aaKnown RBP16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ADA2Q9NZK5 511 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CMYA5Q8N3K9 4069 aa16.44■□□□□ 0.22
TNFRSF1B-204ENST00000536782 TRAV40A0A0B4J280 105 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 HLA-DQA2P01906 255 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 LCATP04180 440 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PRSS12P56730 875 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SPIBQ01892 262 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 MAB21L1Q13394 359 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ZBTB46Q86UZ6 589 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 RNF148Q8N7C7 305 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR11L1Q8NGX0 322 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 Q8TCH9 128 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 ERGIC1Q969X5 290 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PYURFQ96I23 114 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 NUDT16L1Q9BRJ7 211 aaKnown RBP16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 GORASP2Q9H8Y8 452 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CLN8Q9UBY8 286 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SOX21Q9Y651 276 aaPredicted RBP16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 V9GYQ6 96 aa16.43■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR10H3O60404 316 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 DCTN3O75935 186 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 DBPQ10586 325 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 TRAP1Q12931 704 aaKnown RBP16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 DCDC5Q6ZRR9 648 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PGAP1Q75T13 922 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 NAA40Q86UY6 237 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SPRYD4Q8WW59 207 aaPredicted RBP16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SLCO4A1Q96BD0 722 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CYB5R1Q9UHQ9 305 aa16.42■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR6C68A6NDL8 312 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 POM121CA8CG34 1229 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PHYHO14832 338 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 IDH3BO43837 385 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SEMG1P04279 462 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 GGT2P36268 569 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 IFNGR2P38484 337 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 CD200P41217 278 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 TPTEP56180 551 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 WDR25Q64LD2 544 aaPredicted RBP16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 LYPD2Q6UXB3 125 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 FITM2Q8N6M3 262 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SDR9C7Q8NEX9 313 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 MCUR1Q96AQ8 359 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 FN3KQ9H479 309 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PNRC2Q9NPJ4 139 aaKnown RBP16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 UFSP2Q9NUQ7 469 aa16.41■□□□□ 0.22
TNFRSF1B-204ENST00000536782 WNK1Q9H4A3 2382 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 FAM20BO75063 409 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 RAD23AP54725 363 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 PRAMEF6Q5VXH4 476 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 C16orf87Q6PH81 154 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 MRPL21Q7Z2W9 205 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 OR10S1Q8NGN2 331 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 SLC22A4Q9H015 551 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 MAGEL2Q9UJ55 1249 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 KCNG2Q9UJ96 466 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 TMCC3Q9ULS5 477 aa16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 NOP16Q9Y3C1 178 aaKnown RBP16.4■□□□□ 0.22
TNFRSF1B-204ENST00000536782 VWFP04275 2813 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 M0R135 149 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF823P16415 610 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 FGF12P61328 243 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 KHDRBS1Q07666 443 aaKnown RBP eCLIP16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 OR8G1Q15617 311 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 MPPED2Q15777 294 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 CLEC12AQ5QGZ9 265 aa16.39■□□□□ 0.21
TNFRSF1B-204ENST00000536782 ZNF841Q6ZN19 808 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms