RNA–Protein interactions for RNA: ENST00000518743.1

HMGB1P23-201, Transcript of high mobility group box 1 pseudogene 23, humanhuman

BASIC

Gene HMGB1P23, Length 568 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P23-201ENST00000518743 FAM60AQ9NP50 221 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 POLE4Q9NR33 117 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PNO1Q9NRX1 252 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 CISHQ9NSE2 258 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 CUTCQ9NTM9 273 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC23A2Q9UGH3 650 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 PHF11Q9UIL8 331 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 ABCG2Q9UNQ0 655 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 U3KQK5 164 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 SNRNP200O75643 2136 aaKnown RBP3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 HECTD4Q9Y4D8 3996 aa3.68□□□□□ -1.82
HMGB1P23-201ENST00000518743 IGHV3OR16-10A0A075B7F0 116 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SMCO3A2RU48 225 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 FRG2CA6NGY1 282 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SAGE2PA6NJ88 616 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ACOD1A6NK06 481 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 VSTM2BA6NLU5 285 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 H3BMQ9 156 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 PSMD11O00231 422 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC17A2O00624 439 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 HCRTR1O43613 425 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 KDELR3O43731 214 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CXCL13O43927 109 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SH3BGRLO75368 114 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 DIRAS1O95057 198 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 LALBAP00709 142 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 IGLV3-25P01717 112 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 KRT6AP02538 564 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CRYGBP07316 175 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CSF3P09919 207 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 COX5AP20674 150 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 OMGP23515 440 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 FGF9P31371 208 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 OTX1P32242 354 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SYKP43405 635 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 GSK3BP49841 420 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 DAP3P51398 398 aaKnown RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ATP1B3P54709 279 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ERVK11-1P61568 191 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 IRX1P78414 480 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CHRNB3Q05901 458 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SLC10A7Q0GE19 358 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 PIGHQ14442 188 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ABRAXAS2Q15018 415 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 TP53I3Q53FA7 332 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 C1orf220Q5T0J3 134 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 BZW1Q7L1Q6 419 aaKnown RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 TRAPPC5Q8IUR0 188 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CCDC65Q8IXS2 484 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 MCOLN2Q8IZK6 566 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CYP4Z2PQ8N1L4 340 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 KIR3DL3Q8N743 410 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CSNK1A1LQ8N752 337 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 TTC29Q8NA56 475 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZFP62Q8NB50 900 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 MIPOL1Q8TD10 442 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 MAGEE2Q8TD90 523 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 VN1R17PQ8TDU5 208 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 LCN9Q8WX39 176 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 TBRG4Q969Z0 631 aaKnown RBP eCLIP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 RAB3CQ96E17 227 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 COX14Q96I36 57 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 SEC22AQ96IW7 307 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 RHBGQ9H310 441 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 CLSTN2Q9H4D0 955 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 NIPAL2Q9H841 368 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 NT5MQ9NPB1 228 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 MEPEQ9NQ76 525 aaPredicted RBP3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZNF580Q9UK33 172 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 MOB4Q9Y3A3 225 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 PEX16Q9Y5Y5 336 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 DNAH9Q9NYC9 4486 aa3.67□□□□□ -1.82
HMGB1P23-201ENST00000518743 TRGV5A0A0B4J1U4 118 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 CXorf51AA0A1B0GTR3 108 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 GOLGA6L4A6NEF3 574 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IFITM10A6NMD0 228 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 C2orf74A8MZ97 194 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 WRBO00258 174 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 EFNA2O43921 213 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRKYO43930 277 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 OR10H3O60404 316 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 HCN1O60741 890 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 RAMP3O60896 148 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 EPPINO95925 133 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ANXA8P13928 327 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PTNP21246 168 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 IL12AP29459 219 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PRKXP51817 358 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 RGS8P57771 180 aaPredicted RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 RPL32P62910 135 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 KCNJ2P63252 427 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 MRPS11P82912 194 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TAF9Q16594 264 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 TRIM16LQ309B1 348 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 XKR7Q5GH72 579 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ANXA8L1Q5VT79 327 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ZFAND6Q6FIF0 208 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 CCDC137Q6PK04 289 aaKnown RBP3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 PAQR6Q6TCH4 344 aa3.66□□□□□ -1.82
HMGB1P23-201ENST00000518743 ANGPTL8Q6UXH0 198 aa3.66□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms