RNA–Protein interactions for RNA: ENST00000511281.1

HMGB1P47-201, Transcript of high mobility group box 1 pseudogene 47, humanhuman

BASIC

Gene HMGB1P47, Length 589 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P47-201ENST00000511281 IRF4Q15306 451 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 PLET1Q6UQ28 207 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 FAM92BQ6ZTR7 304 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 C12orf56Q8IXR9 622 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 COX18Q8N8Q8 333 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 Q8N976 141 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR8U1Q8NH10 309 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF596Q8TC21 504 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZFP90Q8TF47 636 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 CACNG8Q8WXS5 425 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 TMIGD2Q96BF3 282 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 HDHD3Q9BSH5 251 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ASB8Q9H765 288 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 REEP1Q9H902 201 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 CSNK1G1Q9HCP0 422 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLC40A1Q9NP59 571 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 AGPAT3Q9NRZ7 376 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 TREX1Q9NSU2 369 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ADA2Q9NZK5 511 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF257Q9Y2Q1 563 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNF646O15015 1829 aaPredicted RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZNFX1Q9P2E3 1918 aaKnown RBP3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 NOTCH3Q9UM47 2321 aa3.58□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGLV1-50A0A075B6I6 118 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGHV5-51A0A0C4DH38 117 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A0J9YXV3 536 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 ASTN1O14525 1302 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 YKT6O15498 198 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLC16A7O60669 478 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 CA11O75493 328 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 PLEKHA8P1O95397 391 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 APOA1P02647 267 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 MYCNOSP40205 109 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 RPS10P46783 165 aaKnown RBP3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 AP1S2P56377 157 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 RPS23P62266 143 aaKnown RBP3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 RPL18AQ02543 176 aaKnown RBP3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 ERCC8Q13216 396 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 CAPRIN1Q14444 709 aaKnown RBP3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 ARHGAP21Q5T5U3 1957 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 METTL21CQ5VZV1 264 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 MROH7Q68CQ1 1323 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 CYB5R2Q6BCY4 276 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 DNAJC24Q6P3W2 148 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 PID1Q7Z2X4 250 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 DAW1Q8N136 415 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 TRIML2Q8N7C3 387 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 SNX31Q8N9S9 440 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 NDNFQ8TB73 568 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 PALLDQ8WX93 1383 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 TEAD3Q99594 435 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 NOX3Q9HBY0 568 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLC17A7Q9P2U7 560 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR51B2Q9Y5P1 312 aa3.57□□□□□ -1.84
HMGB1P47-201ENST00000511281 JCADQ9P266 1359 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 PCDH11XQ9BZA7 1347 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 TRBV6-6A0A0A6YYG2 114 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR6C74A6NCV1 312 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 SYCE1LA8MT33 242 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 ANKRD63C9JTQ0 380 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 E7EWF7 191 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 DNASE2O00115 360 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 NVLO15381 856 aaKnown RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 CTNSO60931 367 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 SEMA3DO95025 777 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 SLC25A27O95847 323 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 BCHEP06276 602 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 CD37P11049 281 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 CCL2P13500 99 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 TCN2P20062 427 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 MDKP21741 143 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 BGNP21810 368 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 LOXP28300 417 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 GPR4P46093 362 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 ATP5J2P56134 94 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 KDSRQ06136 332 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 C18orf21Q32NC0 220 aaPredicted RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 ORMDL2Q53FV1 153 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 C11orf53Q8IXP5 236 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 OTUD6BQ8N6M0 293 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR11H7Q8NGC8 314 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR6K6Q8NGW6 343 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 CEP170P1Q96L14 293 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 ZIM3Q96PE6 472 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 SCGB3A2Q96PL1 93 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 OR2A5Q96R48 311 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 UQCC2Q9BRT2 126 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 SAMD10Q9BYL1 202 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 RAB1BQ9H0U4 201 aa3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 TRMT112Q9UI30 125 aaKnown RBP3.56□□□□□ -1.84
HMGB1P47-201ENST00000511281 A0A1B0GVX0 72 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 RFXANKO14593 260 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 CDC40O60508 579 aaKnown RBP eCLIP3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 NMT2O60551 498 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 RAD1O60671 282 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 RDH16O75452 317 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 GABARAPO95166 117 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGHV1-8P0DP01 117 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 PRPS2P11908 318 aa3.55□□□□□ -1.84
HMGB1P47-201ENST00000511281 IGFBP3P17936 291 aaPredicted RBP3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms