RNA–Protein interactions for RNA: ENST00000494185.1

LMNB1-207, Transcript of lamin B1, humanhuman

TSL 2

Gene LMNB1, Length 579 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMNB1-207ENST00000494185 APOBEC3HQ6NTF7 200 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF530Q6P9A1 599 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NDUFAF7Q7L592 441 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ABHD12BQ7Z5M8 362 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 THOC6Q86W42 341 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 FAM71AQ8IYT1 594 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NPWQ8N729 165 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 LINC00469Q8N7U9 141 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CHST4Q8NCG5 386 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR10W1Q8NGF6 305 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR5AR1Q8NGP9 310 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR6K2Q8NGY2 324 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR8U1Q8NH10 309 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR6X1Q8NH79 312 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 OR51E1Q8TCB6 317 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 TMEM239Q8WW34 195 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 FAM151AQ8WW52 585 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 DCUN1D4Q92564 292 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CREB3L1Q96BA8 519 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RPUSD4Q96CM3 377 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CENPNQ96H22 339 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CPB2Q96IY4 423 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF681Q96N22 645 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 FOPNLQ96NB1 174 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF317Q96PQ6 595 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PLEKHF1Q96S99 279 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NAPGQ99747 312 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RASL11BQ9BPW5 248 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PAIP2Q9BPZ3 127 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 CCDC94Q9BW85 323 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PRRG3Q9BZD7 231 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 NAA50Q9GZZ1 169 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 PORCNQ9H237 461 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 GOLPH3Q9H4A6 298 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 UBE2ZQ9H832 354 aaPredicted RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 MMP26Q9NRE1 261 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 SLC39A1Q9NY26 324 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF226Q9NYT6 803 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 VAPAQ9P0L0 249 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 HYOU1Q9Y4L1 999 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 F11RQ9Y624 299 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 TDRD6O60522 2096 aaKnown RBP1.6□□□□□ -2.15
LMNB1-207ENST00000494185 RLFQ13129 1914 aa1.6□□□□□ -2.15
LMNB1-207ENST00000494185 IGLV1-36A0A0B4J1U3 117 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 A0A0B4J2E0 115 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ANKRD20A5PA0PJZ0 165 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ANKRD63C9JTQ0 380 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CDC40O60508 579 aaKnown RBP eCLIP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 SUPT7LO94864 414 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 GCGP01275 180 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 GLAP06280 429 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PNMA6AP0CW24 399 aaPredicted RBP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PGA4P0DJD7 388 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PGA3P0DJD8 388 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PRPS2P11908 318 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF30P17039 623 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PSMC3P17980 439 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 FUT3P21217 361 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 OMGP23515 440 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 IL12BP29460 328 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 P2RY2P41231 377 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PPICP45877 212 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CSNK1A1P48729 337 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 SERPINB8P50452 374 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CAV2P51636 162 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 NCBP2P52298 156 aaKnown RBP eCLIP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF138P52744 262 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 VSX2P58304 361 aaPredicted RBP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 PPP1CBP62140 327 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 GNB2P62879 340 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 SLC7A9P82251 487 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 RPL18AQ02543 176 aaKnown RBP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 KIR2DS1Q14954 304 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 HERPUD1Q15011 391 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ANGPT1Q15389 498 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 TNXAQ16473 311 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 IL17AQ16552 155 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 GUCA2BQ16661 112 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 FAHD1Q6P587 224 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 IGFL3Q6UXB1 125 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 LYPD2Q6UXB3 125 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CD300LGQ6UXG3 332 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 IL34Q6ZMJ4 242 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ACP7Q6ZNF0 438 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ZNF493Q6ZR52 646 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 LINC00173Q6ZV60 143 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 STRADAQ7RTN6 431 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 MRPL55Q7Z7F7 128 aaKnown RBP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CDKL3Q8IVW4 592 aaPredicted RBP1.59□□□□□ -2.15
LMNB1-207ENST00000494185 DAW1Q8N136 415 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 STPG2Q8N412 459 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 CBR4Q8N4T8 237 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 WDR31Q8NA23 367 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 DCAF4L2Q8NA75 395 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 C20orf203Q8NBC4 194 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 MDS2Q8NDY4 140 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 OR51G1Q8NGK1 321 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 OR10Z1Q8NGY1 313 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 ACTRT1Q8TDG2 376 aa1.59□□□□□ -2.15
LMNB1-207ENST00000494185 RNF138Q8WVD3 245 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms