RNA–Protein interactions for RNA: ENST00000493940.2

HSPG2-212, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-212ENST00000493940 SLC36A3Q495N2 470 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 CD300LDQ6UXZ3 194 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 DCXRQ7Z4W1 244 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 LRRC28Q86X40 367 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-212ENST00000493940 LINC00471Q8N535 108 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 ATG16L2Q8NAA4 619 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 PROKR2Q8NFJ6 384 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 OR52L1Q8NGH7 329 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 OR2AJ1Q8NGZ0 328 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 ST7LQ8TDW4 575 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 GIPC3Q8TF64 312 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 MEGF10Q96KG7 1140 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 DIRC2Q96SL1 478 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 GAL3ST1Q99999 423 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 CDADC1Q9BWV3 514 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 CADM1Q9BY67 442 aaKnown RBP10.6□□□□□ -0.71
HSPG2-212ENST00000493940 METTL17Q9H7H0 456 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-212ENST00000493940 PPP1R3EQ9H7J1 279 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 MMP26Q9NRE1 261 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 UBAP1Q9NZ09 502 aa10.6□□□□□ -0.71
HSPG2-212ENST00000493940 CGGBP1Q9UFW8 167 aaPredicted RBP10.6□□□□□ -0.71
HSPG2-212ENST00000493940 TCRBV3S1A0A5B6 114 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 ISPDA4D126 451 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 ZNF593O00488 134 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-212ENST00000493940 LCATP04180 440 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 SLC2A1P11166 492 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 ZNF823P16415 610 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 HNF1AP20823 631 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 SRP14P37108 136 aaKnown RBP10.59□□□□□ -0.71
HSPG2-212ENST00000493940 MMP16P51512 607 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 PRKXP51817 358 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 SLC25A1P53007 311 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 MPPED2Q15777 294 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 TMEM236Q5W0B7 351 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 RPL13AP3Q6NVV1 102 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 SPATC1Q76KD6 591 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 C19orf18Q8NEA5 215 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 OR2T4Q8NH00 348 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 DVL3Q92997 716 aaPredicted RBP10.59□□□□□ -0.71
HSPG2-212ENST00000493940 C19orf24Q9BVV8 132 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 PATZ1Q9HBE1 687 aaKnown RBP10.59□□□□□ -0.71
HSPG2-212ENST00000493940 TMEM165Q9HC07 324 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 CMC2Q9NRP2 79 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 DDX28Q9NUL7 540 aaKnown RBP10.59□□□□□ -0.71
HSPG2-212ENST00000493940 ZNF319Q9P2F9 582 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 PPP1R3CQ9UQK1 317 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 POMPQ9Y244 141 aa10.59□□□□□ -0.71
HSPG2-212ENST00000493940 TRAV20A0A0B4J274 112 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 DHRS12A0PJE2 317 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 AQP12BA6NM10 295 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 F5H0A9 414 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-212ENST00000493940 J3QW42 95 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 M0R135 149 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 GYG2O15488 501 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 GSC2O15499 205 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 PNPP00491 289 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 SPARCP09486 303 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 SLC6A9P48067 706 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 ENTPD1P49961 510 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 TEX30Q5JUR7 227 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 GLYATL3Q5SZD4 288 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 PRAMEF6Q5VXH4 476 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 PRSS45Q7RTY3 260 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 MOGAT3Q86VF5 341 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 AQP12AQ8IXF9 295 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 PAPD5Q8NDF8 572 aaKnown RBP10.58□□□□□ -0.72
HSPG2-212ENST00000493940 OR2T33Q8NG76 320 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 OR5L1Q8NGL2 311 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 OR13G1Q8NGZ3 307 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 RAB39BQ96DA2 213 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 SLAMF6Q96DU3 332 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 ZNF799Q96GE5 643 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 TIMD4Q96H15 378 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 LRGUKQ96M69 825 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 COG8Q96MW5 612 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 ZNF582Q96NG8 517 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-212ENST00000493940 PDP1Q9P0J1 537 aaPredicted RBP10.58□□□□□ -0.72
HSPG2-212ENST00000493940 KCNG2Q9UJ96 466 aa10.58□□□□□ -0.72
HSPG2-212ENST00000493940 C3orf80F5H4A9 247 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 FKBP6O75344 327 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 FSHBP01225 129 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 WNT2P09544 360 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 TNFRSF1AP19438 455 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 FMO3P31513 532 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 GRK5P34947 590 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 HCCSP53701 268 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 RAD23AP54725 363 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 TPTEP56180 551 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 BTG1P62324 171 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 CDK5Q00535 292 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 ECH1Q13011 328 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 GINS1Q14691 196 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 KLHL12Q53G59 568 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 ZMAT1Q5H9K5 638 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 LYPD2Q6UXB3 125 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 DPY19L4Q7Z388 723 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 SPATA24Q86W54 205 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 TIGD4Q8IY51 512 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 BBS1Q8NFJ9 593 aa10.57□□□□□ -0.72
HSPG2-212ENST00000493940 OR6K6Q8NGW6 343 aa10.57□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms