RNA–Protein interactions for RNA: ENST00000484305.1

HDAC1-209, Transcript of histone deacetylase 1, humanhuman

TSL 5

Gene HDAC1, Length 561 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC1-209ENST00000484305 GINS1Q14691 196 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 LINC01590Q5TEZ4 76 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 SLC27A4Q6P1M0 643 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 ZNF771Q7L3S4 317 aaPredicted RBP10.9□□□□□ -0.66
HDAC1-209ENST00000484305 GLCCI1Q86VQ1 547 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 ATG16L2Q8NAA4 619 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 OR10AD1Q8NGE0 317 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 SPTSSAQ969W0 71 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 TMEM186Q96B77 213 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 ZNF799Q96GE5 643 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 ZNF582Q96NG8 517 aaPredicted RBP10.9□□□□□ -0.66
HDAC1-209ENST00000484305 OR2V2Q96R30 315 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 NTN4Q9HB63 628 aa10.9□□□□□ -0.66
HDAC1-209ENST00000484305 DDX28Q9NUL7 540 aaKnown RBP10.9□□□□□ -0.66
HDAC1-209ENST00000484305 MXRA5Q9NR99 2828 aa10.9□□□□□ -0.67
HDAC1-209ENST00000484305 COL6A5A8TX70 2615 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 C5orf63A6NC05 138 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 IGHV2-5P01817 119 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 OSMP13725 252 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 ANXA8P13928 327 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 OTX1P32242 354 aaPredicted RBP10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SLC6A9P48067 706 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 CDK5Q00535 292 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SLC3A1Q07837 685 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SNAI3Q3KNW1 292 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 TEX30Q5JUR7 227 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SPATC1Q76KD6 591 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF283Q8N7M2 679 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 OR13G1Q8NGZ3 307 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 OR51F2Q8NH61 342 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 ST7LQ8TDW4 575 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 OTULINQ96BN8 352 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SLAMF6Q96DU3 332 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 SLC30A2Q9BRI3 323 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 COPS4Q9BT78 406 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF556Q9HAH1 456 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 CENPMQ9NSP4 180 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 TMEM106BQ9NUM4 274 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 HIF1ANQ9NWT6 349 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 PPP1R3CQ9UQK1 317 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 NPTNQ9Y639 398 aa10.89□□□□□ -0.67
HDAC1-209ENST00000484305 IGHV3-64DA0A0J9YX35 117 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 ISPDA4D126 451 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 SURF4O15260 269 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 MLNRO43193 412 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 PLPP2O43688 288 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 IGHV2-70P01814 119 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 HLA-DPB1P04440 258 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 ANPEPP15144 967 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 SELEP16581 610 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 GSTT1P30711 240 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 RASSF2P50749 326 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 PRKXP51817 358 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 BLVRAP53004 296 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 MALLQ13021 153 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 EIF2B1Q14232 305 aaKnown RBP10.88□□□□□ -0.67
HDAC1-209ENST00000484305 TMEM236Q5W0B7 351 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 PLBD1Q6P4A8 553 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 SHQ1Q6PI26 577 aaKnown RBP10.88□□□□□ -0.67
HDAC1-209ENST00000484305 DPY19L4Q7Z388 723 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 PEG10Q86TG7 708 aaKnown RBP10.88□□□□□ -0.67
HDAC1-209ENST00000484305 ERI1Q8IV48 349 aaKnown RBP10.88□□□□□ -0.67
HDAC1-209ENST00000484305 OR2AE1Q8NHA4 323 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 UTP4Q969X6 686 aaKnown RBP10.88□□□□□ -0.67
HDAC1-209ENST00000484305 RAB39BQ96DA2 213 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 SIGLEC11Q96RL6 698 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 INTS14Q96SY0 518 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 KCNJ15Q99712 375 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 GAL3ST1Q99999 423 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 OR51V1Q9H2C8 321 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 MARCH7Q9H992 704 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 GCM1Q9NP62 436 aa10.88□□□□□ -0.67
HDAC1-209ENST00000484305 A0A1B0GWJ7 208 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF878C9JN71 531 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 PRR23D1E9PI22 279 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 F5H5P2 479 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ATP5HO75947 161 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 GLCEO94923 617 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 SBK2P0C263 348 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 PRR23D2P0DMB1 279 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 SLC2A1P11166 492 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 PAICSP22234 425 aaKnown RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 DAPP51397 102 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF92Q03936 586 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 TAF13Q15543 124 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 GLYATL3Q5SZD4 288 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 FAHD1Q6P587 224 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 DRAM2Q6UX65 266 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 PGAP1Q75T13 922 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 CXXC5Q7LFL8 322 aaKnown RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 CPOQ8IVL8 374 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 OR6N2Q8NGY6 317 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ZNF420Q8TAQ5 688 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ZMYND19Q96E35 227 aaPredicted RBP10.87□□□□□ -0.67
HDAC1-209ENST00000484305 NRBF2Q96F24 287 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 MEGF10Q96KG7 1140 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 AMELYQ99218 206 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 ABHD6Q9BV23 337 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 TMEM100Q9NV29 134 aa10.87□□□□□ -0.67
HDAC1-209ENST00000484305 UBAP1Q9NZ09 502 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms