RNA–Protein interactions for RNA: ENST00000477763.1

SMNDC1-205, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 2

Gene SMNDC1, Length 778 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-205ENST00000477763 C12orf54Q6X4T0 127 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 WDR86Q86TI4 376 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 COMMD1Q8N668 190 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 OR11H7Q8NGC8 314 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 OR8U1Q8NH10 309 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 LILRB4Q8NHJ6 448 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 OR51E1Q8TCB6 317 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 PTX4Q96A99 478 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 ISG20Q96AZ6 181 aaKnown RBP2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 HSD17B10Q99714 261 aaKnown RBP2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 TEKT3Q9BXF9 490 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 TMEM38AQ9H6F2 299 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 TDRD3Q9H7E2 651 aaKnown RBP2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 MED4Q9NPJ6 270 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 AGPAT4Q9NRZ5 378 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 MRPL22Q9NWU5 206 aaKnown RBP2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 STK38LQ9Y2H1 464 aa2.72□□□□□ -1.97
SMNDC1-205ENST00000477763 UBN2Q6ZU65 1347 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 PTPRTO14522 1441 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 TSPAN11A1L157 253 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 SYCE1LA8MT33 242 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 ZNF879B4DU55 563 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 H7C417 338 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 BPY2O14599 106 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 SLC9A3R1O14745 358 aaPredicted RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 FOXH1O75593 365 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 HPRT1P00492 218 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 HLA-HP01893 362 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 OR8G3PP0DMU2 310 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 MUC1P15941 1255 aaPredicted RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 PRKACBP22694 351 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 NUP62P37198 522 aaPredicted RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 RBM34P42696 430 aaKnown RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 SYNJ2BPP57105 145 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 RPS23P62266 143 aaKnown RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 TRDNQ13061 729 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 DNAJC3Q13217 504 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 NCF4Q15080 339 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 NKAIN1Q4KMZ8 207 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 Q5W150 140 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 OFCC1Q8IZS5 231 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 BPIFCQ8NFQ6 507 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 RGP1Q92546 391 aaPredicted RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 FLYWCH2Q96CP2 140 aaKnown RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 JSRP1Q96MG2 331 aaPredicted RBP2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 FOXC2Q99958 501 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 PIGUQ9H490 435 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 CLN6Q9NWW5 311 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 MTFP1Q9UDX5 166 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 TBC1D24Q9ULP9 559 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 RFNGQ9Y644 331 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 GMEB1Q9Y692 573 aa2.71□□□□□ -1.98
SMNDC1-205ENST00000477763 PIKFYVEQ9Y2I7 2098 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 FHOD3Q2V2M9 1422 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 NCBP2LA6PVI3 153 aaKnown RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 TEX46H3BTG2 121 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 K7EMT4 169 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 NVLO15381 856 aaKnown RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 YKT6O15498 198 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 HLA-DQA1P01909 254 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 C1GALT1C1LP0DN25 315 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 CTRB1P17538 263 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 CSNK2A2P19784 350 aaPredicted RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 ZNF121P58317 390 aaPredicted RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 PRR3P79522 188 aaKnown RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 DGCR6Q14129 220 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 ZNF266Q14584 549 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 KLHL40Q2TBA0 621 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LCE1CQ5T751 118 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LCE1BQ5T7P3 118 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LIN9Q5TKA1 542 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 TMEM205Q6UW68 189 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 CDKL3Q8IVW4 592 aaPredicted RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LGI3Q8N145 548 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 RBMXL1Q96E39 390 aaKnown RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 OR10C1Q96KK4 312 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LINC00477Q96M19 166 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 COL21A1Q96P44 957 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 MRPS30Q9NP92 439 aaKnown RBP2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 ZDHHC4Q9NPG8 344 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 LZTFL1Q9NQ48 299 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 SLC39A1Q9NY26 324 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 OPN4Q9UHM6 478 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 PALLDQ8WX93 1383 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 MYO10Q9HD67 2058 aa2.7□□□□□ -1.98
SMNDC1-205ENST00000477763 PHLPP2Q6ZVD8 1323 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 IGHV1OR15-9A0A0B4J2B8 117 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 HSBP1L1C9JCN9 74 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 GOLGA8TH3BQL2 631 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 DNASE2O00115 360 aaPredicted RBP2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 REM1O75628 298 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 SLC22A5O76082 557 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 CCDC172P0C7W6 258 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 ZNF688P0C7X2 276 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 NEFHP12036 1026 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 PMELP40967 661 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 SLC1A2P43004 574 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 SLC11A1P49279 550 aa2.69□□□□□ -1.98
SMNDC1-205ENST00000477763 CLDN8P56748 225 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.3 ms