RNA–Protein interactions for RNA: ENST00000467819.5

COL9A3-207, Transcript of collagen type IX alpha 3 chain, humanhuman

TSL 1 (best)

Gene COL9A3, Length 993 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A3-207ENST00000467819 SPAG4Q9NPE6 437 aa17.6■□□□□ 0.41
COL9A3-207ENST00000467819 MDFIC2A0A1B0GVS7 189 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 GMNNO75496 209 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 GADD45GO95257 159 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 HLA-DQA2P01906 255 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 LCATP04180 440 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 PPIAL4GP0DN37 164 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 GK2Q14410 553 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-207ENST00000467819 KRTAP27-1Q3LI81 207 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 SLC36A3Q495N2 470 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 PRR31Q5SQ13 230 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 NAA40Q86UY6 237 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 SDR9C7Q8NEX9 313 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 OR2AJ1Q8NGZ0 328 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 DACT3Q96B18 629 aaPredicted RBP17.59■□□□□ 0.41
COL9A3-207ENST00000467819 ATF6BQ99941 703 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 NUDT16L1Q9BRJ7 211 aaKnown RBP17.59■□□□□ 0.41
COL9A3-207ENST00000467819 CDADC1Q9BWV3 514 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 CLN8Q9UBY8 286 aa17.59■□□□□ 0.41
COL9A3-207ENST00000467819 ARPC3O15145 178 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 PLATP00750 562 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 NOS3P29474 1203 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 SMIM11AP58511 58 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 TRAP1Q12931 704 aaKnown RBP17.58■□□□□ 0.4
COL9A3-207ENST00000467819 MALLQ13021 153 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 MAB21L1Q13394 359 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 PRAMEF6Q5VXH4 476 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 LYPD2Q6UXB3 125 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 C9orf139Q6ZV77 190 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 SLCO4A1Q96BD0 722 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 CMTM5Q96DZ9 223 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 ZNF696Q9H7X3 374 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 UFSP2Q9NUQ7 469 aa17.58■□□□□ 0.4
COL9A3-207ENST00000467819 KIR2DS1A0A191URI9 304 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 A0A1B0GWJ7 208 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 CLDN34H7C241 214 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 KCNAB3O43448 404 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 OR10H3O60404 316 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 FAM20BO75063 409 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 GATA4P43694 442 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 IL13RA1P78552 427 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 HOXA4Q00056 320 aaPredicted RBP17.57■□□□□ 0.4
COL9A3-207ENST00000467819 ECH1Q13011 328 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 HSP90B2PQ58FF3 399 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 BRD3OSQ6XYD6 125 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 PGAP1Q75T13 922 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 ZBTB46Q86UZ6 589 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 OR11L1Q8NGX0 322 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 PYURFQ96I23 114 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 PNRC2Q9NPJ4 139 aaKnown RBP17.57■□□□□ 0.4
COL9A3-207ENST00000467819 CYB5R1Q9UHQ9 305 aa17.57■□□□□ 0.4
COL9A3-207ENST00000467819 OR6C68A6NDL8 312 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 FSTL3O95633 263 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 SEMG1P04279 462 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 GGT2P36268 569 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 CD200P41217 278 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 FGF12P61328 243 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 MPPED2Q15777 294 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 CLEC12AQ5QGZ9 265 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 SLC35F1Q5T1Q4 408 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 WDR25Q64LD2 544 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-207ENST00000467819 DCDC5Q6ZRR9 648 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 SPATC1Q76KD6 591 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 MRPL21Q7Z2W9 205 aaKnown RBP17.56■□□□□ 0.4
COL9A3-207ENST00000467819 FITM2Q8N6M3 262 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 CELF2-AS1Q8N7Q2 184 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 OR10S1Q8NGN2 331 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 SPRYD4Q8WW59 207 aaPredicted RBP17.56■□□□□ 0.4
COL9A3-207ENST00000467819 ELAC2Q9BQ52 826 aaKnown RBP17.56■□□□□ 0.4
COL9A3-207ENST00000467819 MYLK2Q9H1R3 596 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 GORASP2Q9H8Y8 452 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 TMCC3Q9ULS5 477 aa17.56■□□□□ 0.4
COL9A3-207ENST00000467819 PHYHO14832 338 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 RAD23AP54725 363 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 TPTEP56180 551 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 OR8G1Q15617 311 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 BOLLQ8N9W6 283 aaKnown RBP17.55■□□□□ 0.4
COL9A3-207ENST00000467819 Q8TCH9 128 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 ERGIC1Q969X5 290 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 MAP6Q96JE9 813 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 TECTBQ96PL2 329 aa17.55■□□□□ 0.4
COL9A3-207ENST00000467819 NSRP1Q9H0G5 558 aaKnown RBP17.55■□□□□ 0.4
COL9A3-207ENST00000467819 MMADHCQ9H3L0 296 aaPredicted RBP17.55■□□□□ 0.4
COL9A3-207ENST00000467819 MRPL22Q9NWU5 206 aaKnown RBP17.55■□□□□ 0.4
COL9A3-207ENST00000467819 C22orf46C9J442 243 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 M0R135 149 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 HOXA3O43365 443 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-207ENST00000467819 MDKP21741 143 aaPredicted RBP17.54■□□□□ 0.4
COL9A3-207ENST00000467819 CA6P23280 308 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 OMGP23515 440 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 RRM2P31350 389 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 PYCR1P32322 319 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 RPS27P42677 84 aaKnown RBP17.54■□□□□ 0.4
COL9A3-207ENST00000467819 GSSP48637 474 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.54■□□□□ 0.4
COL9A3-207ENST00000467819 DEFB112Q30KQ8 113 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 ZNF841Q6ZN19 808 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 ZNF620Q6ZNG0 422 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 ZDHHC16Q969W1 377 aa17.54■□□□□ 0.4
COL9A3-207ENST00000467819 MCUR1Q96AQ8 359 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms