RNA–Protein interactions for RNA: ENST00000460211.5

ATG4B-213, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 871 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-213ENST00000460211 ZNF878C9JN71 531 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 PRODHO43272 600 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 APOC1P02654 83 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 TACSTD2P09758 323 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 RPS7P62081 194 aaKnown RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 GRB2P62993 217 aaKnown RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 TNFAIP6P98066 277 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 SLC3A1Q07837 685 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 CDK5R2Q13319 367 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 EIF2B1Q14232 305 aaKnown RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 PTGES3Q15185 160 aaKnown RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 RSPO1Q2MKA7 263 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 TMEM236Q5W0B7 351 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 TMEM158Q8WZ71 300 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 GTF3AQ92664 365 aaKnown RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 RAB3IPQ96QF0 476 aaPredicted RBP12.71□□□□□ -0.37
ATG4B-213ENST00000460211 KCNJ15Q99712 375 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 OSBPL10Q9BXB5 764 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 SEMA6AQ9H2E6 1030 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 TOR3AQ9H497 397 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 SP140LQ9H930 580 aa12.71□□□□□ -0.37
ATG4B-213ENST00000460211 CLDN25C9JDP6 229 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 CD55P08174 381 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 IGHV4-31P0DP07 118 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 TNFRSF1AP19438 455 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 IGFBP5P24593 272 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 HSD11B1P28845 292 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 HLXQ14774 488 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-213ENST00000460211 KPNB1Q14974 876 aaKnown RBP12.7□□□□□ -0.38
ATG4B-213ENST00000460211 KDM4DQ6B0I6 523 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 OR2T2Q6IF00 324 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 MRPL21Q7Z2W9 205 aaKnown RBP12.7□□□□□ -0.38
ATG4B-213ENST00000460211 DPY19L4Q7Z388 723 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 ZNF454Q8N9F8 522 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 OR2Z1Q8NG97 314 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 OR13G1Q8NGZ3 307 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 PYDC1Q8WXC3 89 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 YIPF5Q969M3 257 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 ZMYND19Q96E35 227 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-213ENST00000460211 TIMD4Q96H15 378 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 GABARAPL1Q9H0R8 117 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 MARCH7Q9H992 704 aa12.7□□□□□ -0.38
ATG4B-213ENST00000460211 H2AFY2Q9P0M6 372 aaPredicted RBP12.7□□□□□ -0.38
ATG4B-213ENST00000460211 LOC100289279A0A1B0GTE1 492 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 LRP5LA4QPB2 252 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 LILRA1O75019 489 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 RP2O75695 350 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 OTX1P32242 354 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-213ENST00000460211 PRKXP51817 358 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 CHRFAM7AQ494W8 412 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM255AQ5JRV8 349 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 C6orf52Q5T4I8 152 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 LCN1P1Q5VSP4 162 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 PGAP1Q75T13 922 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 RHOUQ7L0Q8 258 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 PEG10Q86TG7 708 aaKnown RBP12.69□□□□□ -0.38
ATG4B-213ENST00000460211 NAA40Q86UY6 237 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 HIST2H2ABQ8IUE6 130 aaPredicted RBP12.69□□□□□ -0.38
ATG4B-213ENST00000460211 TIGD4Q8IY51 512 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 OR5AS1Q8N127 324 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 ZNF283Q8N7M2 679 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 OR8G5Q8NG78 346 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 OR10S1Q8NGN2 331 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 ST7LQ8TDW4 575 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 CCL17Q92583 94 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 RAB1CQ92928 201 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 RBM4BQ9BQ04 359 aaKnown RBP12.69□□□□□ -0.38
ATG4B-213ENST00000460211 ABHD6Q9BV23 337 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 TMEM100Q9NV29 134 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 OAZ3Q9UMX2 235 aa12.69□□□□□ -0.38
ATG4B-213ENST00000460211 IQCF6A8MYZ5 107 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 PHF1O43189 567 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-213ENST00000460211 MITFO75030 526 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-213ENST00000460211 LYNP07948 512 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 H2BFMP0C1H6 154 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 APOFQ13790 326 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 GK2Q14410 553 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-213ENST00000460211 TRIP10Q15642 601 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 FAM166AQ6J272 317 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 SPATC1Q76KD6 591 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 THEM6Q8WUY1 208 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 SPRYD4Q8WW59 207 aaPredicted RBP12.68□□□□□ -0.38
ATG4B-213ENST00000460211 OPA3Q9H6K4 179 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 IL19Q9UHD0 177 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 KCNS2Q9ULS6 477 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 NOP16Q9Y3C1 178 aaKnown RBP12.68□□□□□ -0.38
ATG4B-213ENST00000460211 N6AMT1Q9Y5N5 214 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 ORC6Q9Y5N6 252 aa12.68□□□□□ -0.38
ATG4B-213ENST00000460211 SAC3D1A6NKF1 404 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 ZAR1LA6NP61 321 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 XRCC2O43543 280 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 TGFAP01135 160 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 PSKH1P11801 424 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 SRP9P49458 86 aaKnown RBP12.67□□□□□ -0.38
ATG4B-213ENST00000460211 RAD23AP54725 363 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 SLX4IPQ5VYV7 408 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 Q6ZR03 302 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 BHLHE23Q8NDY6 225 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 OTOSQ8NHW6 89 aa12.67□□□□□ -0.38
ATG4B-213ENST00000460211 RNF133Q8WVZ7 376 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms