RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 A0A1B0GW55 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF354AO60765 605 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L2P0CJ85 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L3P0CJ86 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L4P0CJ87 422 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L5P0CJ88 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L6P0CJ89 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4L7P0CJ90 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 APOBEC1P41238 236 aaKnown RBP22.76■■□□□ 1.23
COL13A1-203ENST00000398969 AFF3P51826 1226 aaKnown RBP22.76■■□□□ 1.23
COL13A1-203ENST00000398969 PLXDC1Q8IUK5 500 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 ZDHHC22Q8N966 263 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 PLPP5Q8NEB5 264 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 OR1M1Q8NGA1 313 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 PPP1R1CQ8WVI7 109 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 C11orf40Q8WZ69 217 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 VRK1Q99986 396 aaPredicted RBP22.76■■□□□ 1.23
COL13A1-203ENST00000398969 PTGES2Q9H7Z7 377 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 DUX4Q9UBX2 424 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 FER1L5A0AVI2 2057 aa22.76■■□□□ 1.23
COL13A1-203ENST00000398969 LAMA1P25391 3075 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 RNF222A6NCQ9 220 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 BPNT1O95861 308 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 VSIG8P0DPA2 414 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 EIF1AXP47813 144 aaKnown RBP22.75■■□□□ 1.23
COL13A1-203ENST00000398969 LUMP51884 338 aaPredicted RBP22.75■■□□□ 1.23
COL13A1-203ENST00000398969 SLC22A24Q8N4F4 322 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 BARX1Q9HBU1 254 aaPredicted RBP22.75■■□□□ 1.23
COL13A1-203ENST00000398969 PRELID1Q9Y255 219 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 VDAC3Q9Y277 283 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 ARID1BQ8NFD5 2236 aaPredicted RBP22.75■■□□□ 1.23
COL13A1-203ENST00000398969 C9orf170A2RU37 121 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 CD96P40200 585 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 ATP1B3P54709 279 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 C17orf67Q0P5P2 114 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 MOB3CQ70IA8 216 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 MITD1Q8WV92 249 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 C5orf34Q96MH7 638 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 PBOV1Q9GZY1 135 aa22.75■■□□□ 1.23
COL13A1-203ENST00000398969 SYT7O43581 403 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 STK17BO94768 372 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 DEFB123Q8N688 67 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 PMEPA1Q969W9 287 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 UQCC2Q9BRT2 126 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 DNTTIP1Q9H147 329 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 PLEKHA6Q9Y2H5 1048 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 DLSTP36957 453 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 BEX5Q5H9J7 111 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 KLHL24Q6TFL4 600 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 OR10H5Q8NGA6 315 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 OR10S1Q8NGN2 331 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF75AQ96N20 296 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 EMC6Q9BV81 110 aa22.74■■□□□ 1.23
COL13A1-203ENST00000398969 DUX1O43812 170 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 HRH1P35367 487 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 STARP49675 285 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 BIDP55957 195 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 CLDN6P56747 220 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 IL13RA1P78552 427 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 FOXF1Q12946 379 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 ATXN7L3Q14CW9 347 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-203ENST00000398969 ACOT7LQ6ZUV0 252 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 DDIT4LQ96D03 193 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 MESP1Q9BRJ9 268 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 CYB5R1Q9UHQ9 305 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 C19orf67A6NJJ6 358 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF208O43345 1280 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 GNB3P16520 340 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 CTRB1P17538 263 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 CTRB2Q6GPI1 263 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 OR52H1Q8NGJ2 320 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 THAP3Q8WTV1 239 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF501Q96CX3 271 aaPredicted RBP22.73■■□□□ 1.23
COL13A1-203ENST00000398969 PHB2Q99623 299 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 IFT46Q9NQC8 304 aa22.73■■□□□ 1.23
COL13A1-203ENST00000398969 OR2AT4A6NND4 320 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 SUMO3P55854 103 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-203ENST00000398969 CFAP77Q6ZQR2 320 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 COX15Q7KZN9 410 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 APCDD1LQ8NCL9 501 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 OR13C9Q8NGT0 318 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF471Q9BX82 626 aaPredicted RBP22.72■■□□□ 1.23
COL13A1-203ENST00000398969 SLC22A11Q9NSA0 550 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 KLHL13Q9P2N7 655 aa22.72■■□□□ 1.23
COL13A1-203ENST00000398969 LIPT2A6NK58 231 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 FAM25EA8MYX2 175 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 H3BML4 177 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 APOC3P02656 99 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 RAB3AP20336 220 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 AVPR2P30518 371 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 GPR85P60893 370 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 ZNF529Q6P280 563 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 FAHD2BQ6P2I3 314 aaPredicted RBP22.71■■□□□ 1.23
COL13A1-203ENST00000398969 ATRAIDQ6UW56 229 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 RHOUQ7L0Q8 258 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 FAHD2AQ96GK7 314 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 FGF21Q9NSA1 209 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 SEMA5BQ9P283 1151 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 SLC5A6Q9Y289 635 aa22.71■■□□□ 1.23
COL13A1-203ENST00000398969 SHISA8B8ZZ34 492 aa22.71■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms