RNA–Protein interactions for RNA: ENST00000374876.4

CCDC40-202, Transcript of coiled-coil domain containing 40, humanhuman

TSL 1 (best) BASIC

Gene CCDC40, Length 2,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-202ENST00000374876 CSF1P09603 554 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 H2BFMP0C1H6 154 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 FSTP19883 344 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 PTGDSP41222 190 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 HTR2BP41595 481 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 CYB561P49447 251 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 GALK2Q01415 458 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 KLRB1Q12918 225 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 OR1C1Q15619 314 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 DEGS2Q6QHC5 323 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 LYPD8Q6UX82 237 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF704Q6ZNC4 412 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-202ENST00000374876 Q6ZS92 163 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 PIAS4Q8N2W9 510 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-202ENST00000374876 SNAPC3Q92966 411 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 RBP7Q96R05 134 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 HES7Q9BYE0 225 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF436Q9C0F3 470 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ATG5Q9H1Y0 275 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 KCNK15Q9H427 330 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 CENPMQ9NSP4 180 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 SPTA1P02549 2419 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 LOC107986453A0A1B0GWG9 222 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ANKRD34BA5PLL1 514 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 C1QL1O75973 258 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 NEURL1O76050 574 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 NDUFB6O95139 128 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ISG15P05161 165 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ACHEP22303 614 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 HTR2CP28335 458 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 GLYATL3Q5SZD4 288 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 FAM166AQ6J272 317 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 CORO6Q6QEF8 472 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF782Q6ZMW2 699 aaPredicted RBP13.76□□□□□ -0.21
CCDC40-202ENST00000374876 POC1BQ8TC44 478 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 TMEM185BQ9H7F4 350 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 FANCFQ9NPI8 374 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 G6PC2Q9NQR9 355 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 SCP2D1Q9UJQ7 156 aa13.76□□□□□ -0.21
CCDC40-202ENST00000374876 FREM3P0C091 2139 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 TMEM272A0A1B0GTI8 110 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 CIB4A0PJX0 185 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 EIF1AYO14602 144 aaKnown RBP13.75□□□□□ -0.21
CCDC40-202ENST00000374876 DOK2O60496 412 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 IGFBP3P17936 291 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-202ENST00000374876 CASRP41180 1078 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 RAD52P43351 418 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 TMEM244Q5VVB8 128 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 C3orf33Q6P1S2 294 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 Q6ZTK2 550 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 UEVLDQ8IX04 471 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF843Q8N446 348 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 Q8NA96 180 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 SPACA9Q96E40 222 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-202ENST00000374876 NKX3-1Q99801 234 aaPredicted RBP13.75□□□□□ -0.21
CCDC40-202ENST00000374876 DLL4Q9NR61 685 aa13.75□□□□□ -0.21
CCDC40-202ENST00000374876 MEGF11A6BM72 1044 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ICMTO60725 284 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 KDM4BO94953 1096 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OPN1LWP04000 364 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 UBCP0CG48 685 aaKnown RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 DNASE1P24855 282 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 PRSS3P35030 304 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ZP1P60852 638 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF169Q14929 603 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 TOMM20Q15388 145 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 INPP5JQ15735 1006 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 GLDNQ6ZMI3 551 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 MDS2Q8NDY4 140 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR2M3Q8NG83 312 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR11H4Q8NGC9 324 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR6M1Q8NGM8 313 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR5M1Q8NGP8 315 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 RNF133Q8WVZ7 376 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 C11orf40Q8WZ69 217 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 SLC25A28Q96A46 364 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 PNPLA2Q96AD5 504 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 GPN1Q9HCN4 374 aaPredicted RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 HPF1Q9NWY4 346 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 B3GAT1Q9P2W7 334 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF69Q9UC07 566 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 SLC23A1Q9UHI7 598 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ALX3O95076 343 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ANXA7P20073 488 aaKnown RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 EIF1AXP47813 144 aaKnown RBP13.74□□□□□ -0.21
CCDC40-202ENST00000374876 CLRN1P58418 232 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 GUCA2AQ02747 115 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 C19orf57Q0VDD7 668 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 CAMK2DQ13557 499 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 ZNF766Q5HY98 468 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 THEM4Q5T1C6 240 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 KLHL24Q6TFL4 600 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 BIVMQ86UB2 503 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 GPAT4Q86UL3 456 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 JAGN1Q8N5M9 183 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 MEIOBQ8N635 442 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR4K17Q8NGC6 315 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 MED30Q96HR3 178 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 GPR137Q96N19 417 aa13.74□□□□□ -0.21
CCDC40-202ENST00000374876 OR5B2Q96R09 309 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms