RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 PSME2Q9UL46 239 aa3.24□□□□□ -1.89
SMCO3-201ENST00000316048 MRPS33Q9Y291 106 aaKnown RBP3.24□□□□□ -1.89
SMCO3-201ENST00000316048 EXOSC1Q9Y3B2 195 aaKnown RBP3.24□□□□□ -1.89
SMCO3-201ENST00000316048 SMIM31A0A1B0GVY4 71 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MFSD2BA6NFX1 497 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ZSCAN5BA6NJL1 495 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 EPM2AB3EWF7 344 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 C5orf58C9J3I9 102 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 H3BNH8 94 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MAGEB3O15480 346 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ERI3O43414 337 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 GPRIN2O60269 458 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 DPM1O60762 260 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 TSC22D2O75157 780 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 UGT2B11O75310 529 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 AK4P27144 223 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MAGEA2P43356 314 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 DHPSP49366 369 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CCT3P49368 545 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ETV1P50549 477 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 DSTNP60981 165 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ESRRGP62508 458 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RELAQ04206 551 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 EIF2B1Q14232 305 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 GNA13Q14344 377 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RAB35Q15286 201 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PCK2Q16822 640 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SLC5A12Q1EHB4 618 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 LIN52Q52LA3 116 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CYBRD1Q53TN4 286 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 LANCL3Q6ZV70 420 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PARGQ86W56 976 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RNF130Q86XS8 419 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 C10orf111Q8N326 155 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ACOT4Q8N9L9 421 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 STEAP2Q8NFT2 490 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 TSTD1Q8NFU3 115 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CIDECQ96AQ7 238 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MS4A6EQ96DS6 147 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RMND5BQ96G75 393 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PDXPQ96GD0 296 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 POM121L2Q96KW2 1035 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 REEP1Q9H902 201 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 LYARQ9NX58 379 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 USE1Q9NZ43 259 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ANGPT4Q9Y264 503 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CA5BQ9Y2D0 317 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 FAM32AQ9Y421 112 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 AUP1Q9Y679 476 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PDE4DIPQ5VU43 2346 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PCM1Q15154 2024 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 A0A087WXM4 84 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 A0A0A6YYD5 115 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 IGKV1-8A0A0C4DH67 115 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SPTY2D1-AS1A0A0U1RR47 76 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 A8MXK9 166 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 C2orf74A8MZ97 194 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 UPK1AO00322 258 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 BTN3A3O00478 584 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 NTN3O00634 580 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 HAT1O14929 419 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SERPINB7O75635 380 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SNAP29O95721 258 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 TBX6O95947 436 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 IGHV3-9P01782 118 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 OPN1MWP04001 364 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 IGHV4-34P06331 123 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SLC35G6P0C7Q6 338 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PABPC4LP0CB38 370 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 OPN1MW2P0DN77 364 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 OPN1MW3P0DN78 364 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 HIST1H1TP22492 207 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ATP5A1P25705 553 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 NTSP30990 170 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 S100A5P33763 92 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MPIP34949 423 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MFAP2P55001 183 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ADARB1P78563 741 aaKnown RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CDK6Q00534 326 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 EWSR1Q01844 656 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SPIBQ01892 262 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 KRTAP1-1Q07627 177 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 IL18R1Q13478 541 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 GK3PQ14409 553 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 REEP3Q6NUK4 255 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 TBPL2Q6SJ96 375 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CLEC2AQ6UVW9 174 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 SPESP1Q6UW49 350 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 C6orf120Q7Z4R8 191 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 PAQR7Q86WK9 346 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 OOSP2Q86WS3 158 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 C8orf59Q8N0T1 100 aaPredicted RBP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 ZNF786Q8N393 782 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 FAM86B1Q8N7N1 296 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CCL4L1Q8NHW4 92 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 CNIH3Q8TBE1 160 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RASSF5Q8WWW0 418 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 TAF15Q92804 592 aaKnown RBP eCLIP3.23□□□□□ -1.89
SMCO3-201ENST00000316048 MAL2Q969L2 176 aa3.23□□□□□ -1.89
SMCO3-201ENST00000316048 RERGQ96A58 199 aaPredicted RBP3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms