RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 KCNJ15Q99712 375 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 TP53TG5Q9Y2B4 290 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 TNFSF12-TNFSF13A0A0A6YY99 330 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 NTN1O95631 604 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 WNT11O96014 354 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 OR4E1P0C645 316 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 FCARP24071 287 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 PPIAP62937 165 aaKnown RBP15.04■□□□□ -0
PHRF1-201ENST00000264555 CD226Q15762 336 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 DPPA2Q7Z7J5 298 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 ARHGEF39Q8N4T4 335 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 EXD3Q8N9H8 876 aa15.04■□□□□ -0
PHRF1-201ENST00000264555 PLPP3O14495 311 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 HYAL3O43820 417 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 SCAND1P57086 179 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 PHLDA2Q53GA4 152 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 FAM199XQ6PEV8 388 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 RPS10P5Q9NQ39 176 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 ICAM5Q9UMF0 924 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 CHATP28329 748 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 RBPJQ06330 500 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 ZXDCQ2QGD7 858 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 TMEM200AQ86VY9 491 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 PLPP5Q8NEB5 264 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 NUBPLQ8TB37 319 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 EMG1Q92979 244 aaKnown RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 TM4SF19Q96DZ7 209 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 PCYT1BQ9Y5K3 369 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 CCDC163A0A0D9SF12 145 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 CEBPZOSA8MTT3 80 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 C1orf196B1AJZ1 125 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 MT-CO2P00403 227 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 FMODQ06828 376 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 ZAR1Q86SH2 424 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 TMEM229BQ8NBD8 167 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 PTP4A1Q93096 173 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 ZNF285Q96NJ3 590 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 CNTNAP3Q9BZ76 1288 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 TEX51A0A1B0GUA7 166 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 RGS11O94810 467 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 GLSO94925 669 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 OR2F2O95006 317 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 PDGFAP04085 211 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 SLC37A1P57057 533 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 OR2F1Q13607 317 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 RTL8AQ9BWD3 113 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 DEFB127Q9H1M4 99 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 HRKO00198 91 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 TOR1AO14656 332 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 TFAP2EQ6VUC0 442 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 SUMF2Q8NBJ7 301 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 OR2AK2Q8NG84 335 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 MAFAQ8NHW3 353 aaPredicted RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 SLAMF9Q96A28 289 aa15.03■□□□□ -0
PHRF1-201ENST00000264555 MRPS18AQ9NVS2 196 aaKnown RBP15.03■□□□□ -0
PHRF1-201ENST00000264555 TRIM64A6NGJ6 449 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 B8ZZF3 427 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 LINC01387J3KSC0 135 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 GCM2O75603 506 aaPredicted RBP15.02■□□□□ -0
PHRF1-201ENST00000264555 ALX3O95076 343 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 CTXN2P0C2S0 81 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 HRH1P35367 487 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 PWWP2BQ6NUJ5 590 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 DTWD2Q8NBA8 298 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 PP6455Q8WZ26 134 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 RBPMSQ93062 196 aaKnown RBP15.02■□□□□ -0
PHRF1-201ENST00000264555 GPA33Q99795 319 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 ZNF2Q9BSG1 426 aaPredicted RBP15.02■□□□□ -0
PHRF1-201ENST00000264555 DEGS1O15121 323 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 TNFSF15O95150 251 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 LSM11P83369 360 aaKnown RBP eCLIP15.02■□□□□ -03e-6■□□□□ 9.4
PHRF1-201ENST00000264555 ISXQ2M1V0 245 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 LINC00303Q3SY05 128 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 TMEM52Q8NDY8 209 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 ASB13Q8WXK3 278 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 CPNE4Q96A23 557 aaPredicted RBP15.02■□□□□ -0
PHRF1-201ENST00000264555 RAB39BQ96DA2 213 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 SEH1LQ96EE3 360 aa15.02■□□□□ -0
PHRF1-201ENST00000264555 LRP5LA4QPB2 252 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 GPANK1O95872 356 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 PRSS42Q7Z5A4 293 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 PTDSS2Q9BVG9 487 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 OGG1O15527 345 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 B4GALT1P15291 398 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 THBS4P35443 961 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 CLN3Q13286 438 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 NPEPL1Q8NDH3 523 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 OR4D6Q8NGJ1 314 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 OR11L1Q8NGX0 322 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 ROBO4Q8WZ75 1007 aa15.02□□□□□ -0.01
PHRF1-201ENST00000264555 C5orf49A4QMS7 147 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 SELEP16581 610 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 SRSF5Q13243 272 aaKnown RBP15.01□□□□□ -0.01
PHRF1-201ENST00000264555 PTPMT1Q8WUK0 201 aaPredicted RBP15.01□□□□□ -0.01
PHRF1-201ENST00000264555 LHX9Q9NQ69 397 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 CT45A8P0DMV1 189 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 CT45A9P0DMV2 189 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 OMGP23515 440 aa15.01□□□□□ -0.01
PHRF1-201ENST00000264555 PAN3Q58A45 887 aaKnown RBP15.01□□□□□ -0.01
PHRF1-201ENST00000264555 CT45A2Q5DJT8 189 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms