RNA–Protein interactions for RNA: ENSMUST00000113440.1

Ccdc88b-201, Transcript of Coiled-coil domain-containing protein 88B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc88b, Length 4,959 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc88b-201ENSMUST00000113440 Ajap1A2ALI5 412 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 OtpO09113 325 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 PlauP06869 433 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Prph2P15499 346 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lemd1Q14C37 129 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Kdm4dQ3U2K5 510 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 1700012B07RikQ3V0S8 276 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 St6gal1Q64685 403 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1254Q8VFB1 314 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rnf141Q99MB7 230 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tmem179bQ9CY24 219 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hsf4Q9R0L1 492 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vamp5Q9Z2P8 102 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 2610044O15Rik8A0A087WRJ1 410 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm5475D3YV11 175 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr430E9Q5F1 317 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r204I7HIK1 302 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r27K7N688 303 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 EomesO54839 707 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 GdnfP48540 211 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Drd1Q61616 446 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pced1aQ6P1Z5 449 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Kansl1Q80TG1 1036 aaKnown RBP14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 CyrenQ8BHZ5 157 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 F830045P16RikQ8BJ95 487 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 NraddQ8CJ26 228 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn1r208Q8R275 308 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fitm1Q91V79 292 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pop4Q9CR08 221 aa14.2□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 4933403O08RikF6UK53 379 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hbb-yP02104 147 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ube2fbQ3UWQ3 185 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp729aQ4QQP3 973 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fkbp10Q61576 581 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ffar1Q76JU9 300 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr524Q7TRU0 318 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc1a7Q8JZR4 559 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Med6Q921D4 246 aaKnown RBP14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 TfecQ9WTW4 317 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Cav2Q9WVC3 162 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Smim18J3QNP2 93 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Il10rbQ61190 349 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr907Q7TRC7 310 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lrrc3bQ8VCH9 259 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1388Q8VFA3 311 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Trappc4Q9ES56 219 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Znf346Q9R0B7 294 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gstz1Q9WVL0 216 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr773F6VS78 311 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Phxr1P15973 60 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 LhcgrP30730 700 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ceacam1P31809 521 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Cdk5P49615 292 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr18Q0VAX9 331 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc16a11Q5NC32 447 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Kcnc3Q63959 769 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr314Q7TRZ7 330 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 C130079G13RikQ8BUY2 280 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr772Q8VGC5 311 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr1257Q8VGP0 309 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 HrgQ9ESB3 525 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 HpgdsQ9JHF7 199 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 DptQ9QZZ6 201 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Mecp2Q9Z2D6 484 aaKnown RBP14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Dcst2A0A140LIJ0 701 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Btbd8D3YUB6 377 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ceacam19Q3TQ88 271 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc5a12Q49B93 619 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Clvs2Q8BG92 327 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc5a7Q8BGY9 580 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr993Q8VF75 314 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr52Q8VFL0 319 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr339Q8VGK8 309 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr646Q8VGW2 312 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hyal1Q91ZJ9 462 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Nkain1Q9D035 207 aa14.19□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Myf5P24699 255 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fcgr1P26151 404 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Slc22a13Q6A4L0 551 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fbxl14Q8BID8 400 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Arf2Q8BSL7 181 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Olfr307Q8VFN8 313 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp300A2AE21 645 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Arl16B1ATY8 173 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm4181E9Q7X3 184 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Fli1P26323 452 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tacr1P30548 407 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Hrh3P58406 445 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rps10P63325 165 aaKnown RBP14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Tmem18Q3TUD9 140 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Znf503Q7TMA2 652 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Lkaaear1Q8BIG2 198 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Zfp3Q8BLB0 497 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Mblac1Q8BWY4 260 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Rbm7Q9CQT2 265 aaKnown RBP14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Gm572B1ARY8 399 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Vmn2r76E9Q3F5 853 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Ms4a7E9Q9V5 267 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Pou3f2P31360 445 aa14.18□□□□□ -0.14
Ccdc88b-201ENSMUST00000113440 Epha4Q03137 986 aa14.18□□□□□ -0.14
Retrieved 100 of 22,080 RNA–protein pairs in 51.7 ms